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SCN7A sodium voltage-gated channel alpha subunit 7 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 704414, updated on 17-Aug-2024

Summary

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Official Symbol
SCN7Aprovided by VGNC
Official Full Name
sodium voltage-gated channel alpha subunit 7provided by VGNC
Primary source
VGNC:VGNC:76988
See related
Ensembl:ENSMMUG00000018510
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SCN7A in Genome Data Viewer
Location:
chromosome: 12
Exon count:
26
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (53563216..53665721, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (53339977..53442536, complement)

Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106992602 Neighboring gene sodium voltage-gated channel alpha subunit 9 Neighboring gene L-lactate dehydrogenase B chain pseudogene Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC106992604 Neighboring gene uncharacterized LOC114671342 Neighboring gene xin actin binding repeat containing 2 Neighboring gene uncharacterized LOC114671343

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables voltage-gated sodium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane depolarization during action potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuronal action potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of voltage-gated sodium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium channel protein type 7 subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041765.1 Reference Mmul_10 Primary Assembly

    Range
    53563216..53665721 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015110281.2 → XP_014965767.2  sodium channel protein type 7 subunit alpha

    UniProtKB/TrEMBL
    A0A1D5Q072
    Related
    ENSMMUP00000041434.2, ENSMMUT00000055669.2
    Conserved Domains (3) summary
    cd13433
    Location:1193 → 1245
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:932 → 1197
    Ion_trans; Ion transport protein
    pfam06512
    Location:742 → 926
    Na_trans_assoc; Sodium ion transport-associated

RNA

  1. XR_001438623.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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