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ZGRF1 zinc finger GRF-type containing 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 703497, updated on 5-Mar-2024

Summary

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Gene symbol
ZGRF1
Gene description
zinc finger GRF-type containing 1
See related
Ensembl:ENSMMUG00000023591
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ZGRF1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
29
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (110821116..110906012, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (111472174..111557651, complement)

Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene TOX high mobility group box family member 4-like Neighboring gene uncharacterized LOC114678382 Neighboring gene neurogenin 2 Neighboring gene La ribonucleoprotein 7, transcriptional regulator Neighboring gene microRNA mir-302d Neighboring gene microRNA mir-367

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein ZGRF1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041758.1 Reference Mmul_10 Primary Assembly

    Range
    110821116..110906012 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015139054.2 → XP_014994540.2  protein ZGRF1 isoform X4

    UniProtKB/TrEMBL
    A0A5F7ZY82
    Conserved Domains (4) summary
    TIGR00376
    Location:1421 → 1833
    TIGR00376; DNA helicase, putative
    pfam06839
    Location:1119 → 1163
    zf-GRF; GRF zinc finger
    pfam10382
    Location:4 → 73
    DUF2439; Protein of unknown function (DUF2439)
    pfam13087
    Location:1627 → 1811
    AAA_12; AAA domain

  2. XM_015139053.2 → XP_014994539.2  protein ZGRF1 isoform X3

    UniProtKB/TrEMBL
    A0A5F7ZY82, A0A5F8AT44
    Related
    ENSMMUP00000080992.1, ENSMMUT00000104584.1
    Conserved Domains (4) summary
    TIGR00376
    Location:1468 → 1880
    TIGR00376; DNA helicase, putative
    pfam06839
    Location:1166 → 1210
    zf-GRF; GRF zinc finger
    pfam10382
    Location:4 → 73
    DUF2439; Protein of unknown function (DUF2439)
    pfam13087
    Location:1674 → 1858
    AAA_12; AAA domain

  3. XM_015139049.2 → XP_014994535.2  protein ZGRF1 isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZY82, F7HFN8
    Conserved Domains (4) summary
    TIGR00376
    Location:1621 → 2033
    TIGR00376; DNA helicase, putative
    pfam06839
    Location:1319 → 1363
    zf-GRF; GRF zinc finger
    pfam10382
    Location:4 → 73
    DUF2439; Protein of unknown function (DUF2439)
    pfam13087
    Location:1827 → 2011
    AAA_12; AAA domain

  4. XM_015139055.2 → XP_014994541.2  protein ZGRF1 isoform X5

    UniProtKB/TrEMBL
    F7HFN4
    Related
    ENSMMUP00000031059.4, ENSMMUT00000033189.4
    Conserved Domains (4) summary
    TIGR00376
    Location:1649 → 2061
    TIGR00376; DNA helicase, putative
    pfam06839
    Location:1347 → 1391
    zf-GRF; GRF zinc finger
    pfam10382
    Location:4 → 73
    DUF2439; Protein of unknown function (DUF2439)
    pfam13087
    Location:1855 → 2039
    AAA_12; AAA domain

  5. XM_015139050.2 → XP_014994536.2  protein ZGRF1 isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZY82, F7HFN8
    Related
    ENSMMUP00000031058.4, ENSMMUT00000033188.4
    Conserved Domains (4) summary
    TIGR00376
    Location:1621 → 2033
    TIGR00376; DNA helicase, putative
    pfam06839
    Location:1319 → 1363
    zf-GRF; GRF zinc finger
    pfam10382
    Location:4 → 73
    DUF2439; Protein of unknown function (DUF2439)
    pfam13087
    Location:1827 → 2011
    AAA_12; AAA domain

  6. XM_015139051.2 → XP_014994537.2  protein ZGRF1 isoform X2

    UniProtKB/TrEMBL
    A0A5F7Z8G9, A0A5F7ZY82
    Related
    ENSMMUP00000061422.1, ENSMMUT00000080629.1
    Conserved Domains (4) summary
    TIGR00376
    Location:1563 → 1975
    TIGR00376; DNA helicase, putative
    pfam06839
    Location:1261 → 1305
    zf-GRF; GRF zinc finger
    pfam10382
    Location:4 → 73
    DUF2439; Protein of unknown function (DUF2439)
    pfam13087
    Location:1769 → 1953
    AAA_12; AAA domain

RNA

  1. XR_003729757.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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