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ITGA1 integrin subunit alpha 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 703456, updated on 17-Aug-2024

Summary

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Official Symbol
ITGA1provided by VGNC
Official Full Name
integrin subunit alpha 1provided by VGNC
Primary source
VGNC:VGNC:73772
See related
Ensembl:ENSMMUG00000001753
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ITGA1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
29
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (51072315..51242993)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (53685824..53857753)

Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2 N-like Neighboring gene mortality factor 4-like protein 2 Neighboring gene uncharacterized LOC114678785 Neighboring gene pelota mRNA surveillance and ribosome rescue factor Neighboring gene uncharacterized LOC106998766 Neighboring gene integrin subunit alpha 2 Neighboring gene molybdenum cofactor synthesis 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin alpha-1
Names
integrin, alpha 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041759.1 Reference Mmul_10 Primary Assembly

    Range
    51072315..51242993
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001094788.4 → XP_001094788.1  integrin alpha-1

    See identical proteins and their annotated locations for XP_001094788.1

    UniProtKB/TrEMBL
    F7GLS1
    Related
    ENSMMUP00000002340.4, ENSMMUT00000002475.4
    Conserved Domains (3) summary
    smart00191
    Location:568 → 621
    Int_alpha; Integrin alpha (beta-propellor repeats)
    cd01469
    Location:171 → 351
    vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
    pfam08441
    Location:664 → 1051
    Integrin_alpha2; Integrin alpha
Nucleotide Protein
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Gene LinkOut

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