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NLRP4 NLR family pyrin domain containing 4 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 703431, updated on 17-Aug-2024

Summary

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Official Symbol
NLRP4provided by VGNC
Official Full Name
NLR family pyrin domain containing 4provided by VGNC
Primary source
VGNC:VGNC:75233
See related
Ensembl:ENSMMUG00000028711
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human all
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Genomic context

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See NLRP4 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (55610735..55641024)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (53257579..53300398, complement)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene ret finger protein-like 4A Neighboring gene NLR family pyrin domain containing 11 Neighboring gene NLR family pyrin domain containing 13 Neighboring gene NLR family pyrin domain containing 8 Neighboring gene NLR family pyrin domain containing 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NACHT, LRR and PYD domains-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    55610735..55641024
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028839258.1 → XP_028695091.1  NACHT, LRR and PYD domains-containing protein 4

    UniProtKB/TrEMBL
    F7H800, G7NNW1
    Related
    ENSMMUP00000031420.2, ENSMMUT00000038321.3
    Conserved Domains (4) summary
    cd08320
    Location:11 → 92
    Pyrin_NALPs; Pyrin death domain found in NALP proteins
    sd00034
    Location:725 → 752
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam05729
    Location:149 → 318
    NACHT; NACHT domain
    cl29113
    Location:685 → 957
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials