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GINS4 GINS complex subunit 4 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 703350, updated on 17-Aug-2024

Summary

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Official Symbol
GINS4provided by VGNC
Official Full Name
GINS complex subunit 4provided by VGNC
Primary source
VGNC:VGNC:73021
Locus tag
EGK_18881
See related
Ensembl:ENSMMUG00000009123
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See GINS4 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (42117604..42133757)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (43219193..43235523, complement)

Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene golgin A7 Neighboring gene keratin, type I cytoskeletal 18 pseudogene Neighboring gene uncharacterized LOC114680235 Neighboring gene glycerol-3-phosphate acyltransferase 4 Neighboring gene NK6 homeobox 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in DNA-templated DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via break-induced replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GINS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA replication complex GINS protein SLD5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001261222.2 → NP_001248151.1  DNA replication complex GINS protein SLD5

    See identical proteins and their annotated locations for NP_001248151.1

    Status: PROVISIONAL

    Source sequence(s)
    JV045736
    UniProtKB/TrEMBL
    A0A8J8YSV6, F7E9E1, G7MZ67
    Related
    ENSMMUP00000011968.2, ENSMMUT00000012763.4
    Conserved Domains (2) summary
    cd11711
    Location:26 → 146
    GINS_A_Sld5; Alpha-helical domain of GINS complex protein Sld5
    pfam16922
    Location:165 → 223
    SLD5_C; DNA replication complex GINS protein SLD5 C-terminus

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041761.1 Reference Mmul_10 Primary Assembly

    Range
    42117604..42133757
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015145234.2 → XP_015000720.1  DNA replication complex GINS protein SLD5 isoform X2

    Conserved Domains (2) summary
    cd11711
    Location:26 → 146
    GINS_A_Sld5; Alpha-helical domain of GINS complex protein Sld5
    pfam16922
    Location:165 → 193
    SLD5_C; DNA replication complex GINS protein SLD5 C-terminus

  2. XM_015145232.2 → XP_015000718.1  DNA replication complex GINS protein SLD5 isoform X1

    UniProtKB/TrEMBL
    A0A8J8YSV6, F7E9E1, G7MZ67
    Conserved Domains (2) summary
    cd11711
    Location:26 → 146
    GINS_A_Sld5; Alpha-helical domain of GINS complex protein Sld5
    pfam16922
    Location:165 → 223
    SLD5_C; DNA replication complex GINS protein SLD5 C-terminus

  3. XM_015145231.2 → XP_015000717.1  DNA replication complex GINS protein SLD5 isoform X1

    UniProtKB/TrEMBL
    A0A8J8YSV6, F7E9E1, G7MZ67
    Conserved Domains (2) summary
    cd11711
    Location:26 → 146
    GINS_A_Sld5; Alpha-helical domain of GINS complex protein Sld5
    pfam16922
    Location:165 → 223
    SLD5_C; DNA replication complex GINS protein SLD5 C-terminus

  4. XM_028852205.1 → XP_028708038.1  DNA replication complex GINS protein SLD5 isoform X1

    UniProtKB/TrEMBL
    A0A8J8YSV6, F7E9E1, G7MZ67
    Conserved Domains (2) summary
    cd11711
    Location:26 → 146
    GINS_A_Sld5; Alpha-helical domain of GINS complex protein Sld5
    pfam16922
    Location:165 → 223
    SLD5_C; DNA replication complex GINS protein SLD5 C-terminus

  5. XM_015145233.2 → XP_015000719.1  DNA replication complex GINS protein SLD5 isoform X1

    UniProtKB/TrEMBL
    A0A8J8YSV6, F7E9E1, G7MZ67
    Conserved Domains (2) summary
    cd11711
    Location:26 → 146
    GINS_A_Sld5; Alpha-helical domain of GINS complex protein Sld5
    pfam16922
    Location:165 → 223
    SLD5_C; DNA replication complex GINS protein SLD5 C-terminus
Nucleotide Protein
Heading Accession and Version

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