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ANKIB1 ankyrin repeat and IBR domain containing 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 703273, updated on 17-Aug-2024

Summary

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Official Symbol
ANKIB1provided by VGNC
Official Full Name
ankyrin repeat and IBR domain containing 1provided by VGNC
Primary source
VGNC:VGNC:69670
Locus tag
EGK_13946
See related
Ensembl:ENSMMUG00000005120
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ANKIB1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
21
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (113737339..113892430, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (117512149..117512433) , (117569499..117654755)

Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene GATA zinc finger domain containing 1 Neighboring gene endogenous retrovirus group W member 1, envelope Neighboring gene mitochondrial intermembrane space import and assembly protein 40 pseudogene Neighboring gene transmembrane BAX inhibitor motif containing 7 Neighboring gene KRIT1 ankyrin repeat containing Neighboring gene uncharacterized LOC114676989 Neighboring gene leucine rich repeats and death domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin conjugating enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and IBR domain-containing protein 1
NP_001244698.1
XP_028700718.1
XP_028700719.1
XP_028700720.1
XP_028700721.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001257769.1 → NP_001244698.1  ankyrin repeat and IBR domain-containing protein 1

    See identical proteins and their annotated locations for NP_001244698.1

    Status: PROVISIONAL

    Source sequence(s)
    JU321809
    UniProtKB/TrEMBL
    A0A5F8AC15, A0A8J8XCU0, F7BY13, G7MLW9
    Related
    ENSMMUP00000073466.1, ENSMMUT00000097704.1
    Conserved Domains (4) summary
    COG0666
    Location:28 → 198
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:47 → 76
    ANK; ANK repeat [structural motif]
    cd16774
    Location:332 → 388
    RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins
    pfam01485
    Location:402 → 475
    IBR; IBR domain, a half RING-finger domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041756.1 Reference Mmul_10 Primary Assembly

    Range
    113737339..113892430 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028844888.1 → XP_028700721.1  ankyrin repeat and IBR domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A5F8AC15, F6ULZ1
    Related
    ENSMMUP00000035056.3, ENSMMUT00000042054.3
    Conserved Domains (4) summary
    sd00045
    Location:47 → 76
    ANK; ANK repeat [structural motif]
    cd16774
    Location:271 → 327
    RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins
    pfam00023
    Location:47 → 76
    Ank; Ankyrin repeat
    pfam01485
    Location:341 → 414
    IBR; IBR domain, a half RING-finger domain

  2. XM_028844887.1 → XP_028700720.1  ankyrin repeat and IBR domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A5F8AC15, H9FW21
    Related
    ENSMMUP00000074859.1, ENSMMUT00000089103.1
    Conserved Domains (4) summary
    COG0666
    Location:28 → 198
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:47 → 76
    ANK; ANK repeat [structural motif]
    cd16774
    Location:332 → 388
    RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins
    pfam01485
    Location:402 → 475
    IBR; IBR domain, a half RING-finger domain

  3. XM_028844886.1 → XP_028700719.1  ankyrin repeat and IBR domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A5F8AC15, A0A8J8XCU0, F7BY13, G7MLW9
    Conserved Domains (4) summary
    COG0666
    Location:28 → 198
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:47 → 76
    ANK; ANK repeat [structural motif]
    cd16774
    Location:332 → 388
    RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins
    pfam01485
    Location:402 → 475
    IBR; IBR domain, a half RING-finger domain

  4. XM_028844885.1 → XP_028700718.1  ankyrin repeat and IBR domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A5F8AC15, A0A8J8XCU0, F7BY13, G7MLW9
    Related
    ENSMMUP00000061946.1, ENSMMUT00000099476.1
    Conserved Domains (4) summary
    COG0666
    Location:28 → 198
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:47 → 76
    ANK; ANK repeat [structural motif]
    cd16774
    Location:332 → 388
    RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins
    pfam01485
    Location:402 → 475
    IBR; IBR domain, a half RING-finger domain
Nucleotide Protein
Heading Accession and Version

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