U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TSPAN6 tetraspanin 6 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 703166, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
TSPAN6provided by VGNC
Official Full Name
tetraspanin 6provided by VGNC
Primary source
VGNC:VGNC:78565
See related
Ensembl:ENSMMUG00000008209
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TSPAN6 in Genome Data Viewer
Location:
chromosome: X
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (97407415..97418436, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (94788298..94799305, complement)

Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene protocadherin 19 Neighboring gene tenomodulin Neighboring gene sushi repeat containing protein X-linked 2 Neighboring gene synaptotagmin like 4 Neighboring gene thymosin beta-4 pseudogene

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tetraspanin-6
Names
tetraspanin-6-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041774.1 Reference Mmul_10 Primary Assembly

    Range
    97407415..97418436 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015127798.2 → XP_014983284.2  tetraspanin-6 isoform X1

    UniProtKB/TrEMBL
    A0A1D5RFV0, G7NSF5
    Related
    ENSMMUP00000059194.2, ENSMMUT00000063970.2
    Conserved Domains (2) summary
    cd03161
    Location:112 → 209
    TM4SF2_6_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF2_6_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:17 → 233
    Tetraspannin; Tetraspanin family

  2. XM_015127799.2 → XP_014983285.2  tetraspanin-6 isoform X2

    Conserved Domains (1) summary
    cd03161
    Location:24 → 121
    TM4SF2_6_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF2_6_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...

  3. XM_028842253.1 → XP_028698086.1  tetraspanin-6 isoform X2

    Conserved Domains (1) summary
    cd03161
    Location:24 → 121
    TM4SF2_6_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF2_6_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.