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IFT122 intraflagellar transport 122 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 703060, updated on 17-Aug-2024

Summary

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Official Symbol
IFT122provided by VGNC
Official Full Name
intraflagellar transport 122provided by VGNC
Primary source
VGNC:VGNC:84167
See related
Ensembl:ENSMMUG00000012727
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
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Genomic context

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See IFT122 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
33
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (146959712..147055960, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (50688448..50788478)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene H1.8 linker histone Neighboring gene rhodopsin Neighboring gene methyl-CpG binding domain 4, DNA glycosylase Neighboring gene EF-hand calcium binding domain 12 Neighboring gene small nucleolar RNA SNORA7 Neighboring gene 60S ribosomal protein L32-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intraciliary retrograde transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-motile cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of intraciliary transport particle A IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in non-motile cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intraflagellar transport protein 122 homolog
Names
intraflagellar transport 122 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    146959712..147055960 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015130154.2 → XP_014985640.1  intraflagellar transport protein 122 homolog isoform X4

    UniProtKB/TrEMBL
    F7ETP2, F7ETR7, H9Z212
    Related
    ENSMMUP00000016715.4, ENSMMUT00000017850.4
    Conserved Domains (3) summary
    COG2319
    Location:15 → 289
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:15 → 51
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:49 → 291
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_015130153.2 → XP_014985639.1  intraflagellar transport protein 122 homolog isoform X3

    UniProtKB/TrEMBL
    F7ETP2
    Conserved Domains (3) summary
    COG2319
    Location:15 → 289
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:15 → 51
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:49 → 291
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_015130152.2 → XP_014985638.1  intraflagellar transport protein 122 homolog isoform X2

    UniProtKB/TrEMBL
    A0A5K1TWI3, F7ETP6
    Related
    ENSMMUP00000016722.4, ENSMMUT00000017857.4
    Conserved Domains (3) summary
    COG2319
    Location:4 → 348
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:15 → 51
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:15 → 190
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_015130150.2 → XP_014985636.1  intraflagellar transport protein 122 homolog isoform X1

    UniProtKB/TrEMBL
    F7ETP6
    Related
    ENSMMUP00000016718.4, ENSMMUT00000017853.4
    Conserved Domains (3) summary
    COG2319
    Location:4 → 348
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:15 → 51
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:15 → 190
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  5. XM_028844500.1 → XP_028700333.1  intraflagellar transport protein 122 homolog isoform X7

    UniProtKB/TrEMBL
    F6VBT6
    Related
    ENSMMUP00000038980.3, ENSMMUT00000045941.3
    Conserved Domains (3) summary
    TIGR02917
    Location:501 → 709
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00039
    Location:30 → 72
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:24 → 142
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  6. XM_015130157.2 → XP_014985643.1  intraflagellar transport protein 122 homolog isoform X7

    UniProtKB/TrEMBL
    F6VBT6
    Conserved Domains (3) summary
    TIGR02917
    Location:501 → 709
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00039
    Location:30 → 72
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:24 → 142
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  7. XM_015130155.2 → XP_014985641.1  intraflagellar transport protein 122 homolog isoform X6

    UniProtKB/TrEMBL
    F6VBT6
    Conserved Domains (4) summary
    COG2319
    Location:2 → 200
    WD40; WD40 repeat [General function prediction only]
    TIGR02917
    Location:560 → 768
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00039
    Location:133 → 167
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:134 → 200
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  8. XM_028844499.1 → XP_028700332.1  intraflagellar transport protein 122 homolog isoform X6

    UniProtKB/TrEMBL
    F6VBT6
    Conserved Domains (4) summary
    COG2319
    Location:2 → 200
    WD40; WD40 repeat [General function prediction only]
    TIGR02917
    Location:560 → 768
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00039
    Location:133 → 167
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:134 → 200
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  9. XM_028844497.1 → XP_028700330.1  intraflagellar transport protein 122 homolog isoform X6

    UniProtKB/TrEMBL
    F6VBT6
    Conserved Domains (4) summary
    COG2319
    Location:2 → 200
    WD40; WD40 repeat [General function prediction only]
    TIGR02917
    Location:560 → 768
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00039
    Location:133 → 167
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:134 → 200
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  10. XM_028844498.1 → XP_028700331.1  intraflagellar transport protein 122 homolog isoform X6

    UniProtKB/TrEMBL
    F6VBT6
    Conserved Domains (4) summary
    COG2319
    Location:2 → 200
    WD40; WD40 repeat [General function prediction only]
    TIGR02917
    Location:560 → 768
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00039
    Location:133 → 167
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:134 → 200
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  11. XM_028844496.1 → XP_028700329.1  intraflagellar transport protein 122 homolog isoform X5

    UniProtKB/TrEMBL
    F7ETG8, I2CVQ7
    Related
    ENSMMUP00000016723.4, ENSMMUT00000017858.4
    Conserved Domains (3) summary
    TIGR02917
    Location:710 → 918
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00039
    Location:15 → 51
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:15 → 190
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

RNA

  1. XR_003727419.1 RNA Sequence

  2. XR_001442874.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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