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RALYL RALY RNA binding protein like [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 702992, updated on 17-Aug-2024

Summary

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Official Symbol
RALYLprovided by VGNC
Official Full Name
RALY RNA binding protein likeprovided by VGNC
Primary source
VGNC:VGNC:82217
See related
Ensembl:ENSMMUG00000007115
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See RALYL in Genome Data Viewer
Location:
chromosome: 8
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (84735021..85462471)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (82934874..83316011)

Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106999833 Neighboring gene sorting nexin 16 Neighboring gene tropomyosin alpha-3 chain-like Neighboring gene microRNA mir-7198 Neighboring gene U6 spliceosomal RNA Neighboring gene 26S proteasome regulatory subunit 7-like Neighboring gene glucosamine 6-phosphate N-acetyltransferase-like Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC106999835 Neighboring gene leucine rich repeat and coiled-coil centrosomal protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the Macaca mulatta transcriptome and the sequence divergence between Macaca and human. Magness CL, et al. Genome Biol, 2005. PMID 15998449, Free PMC Article
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding Raly-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001201567.3 → NP_001188496.1  RNA-binding Raly-like protein isoform 2

    See identical proteins and their annotated locations for NP_001188496.1

    Status: VALIDATED

    Source sequence(s)
    QNVO02000453
    UniProtKB/TrEMBL
    A0A1D5R9N5, H9EMQ8
    Conserved Domains (2) summary
    pfam10779
    Location:199 → 244
    XhlA; Haemolysin XhlA
    cl17169
    Location:15 → 97
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. NM_001361229.2 → NP_001348158.1  RNA-binding Raly-like protein isoform 1

    Status: VALIDATED

    Source sequence(s)
    QNVO02000453
    UniProtKB/TrEMBL
    F7DTZ7, H9FQ35
    Related
    ENSMMUP00000009320.4, ENSMMUT00000009927.4
    Conserved Domains (2) summary
    pfam10779
    Location:212 → 257
    XhlA; Haemolysin XhlA
    cl17169
    Location:28 → 110
    RRM_SF; RNA recognition motif (RRM) superfamily

  3. NM_001361230.2 → NP_001348159.1  RNA-binding Raly-like protein isoform 2

    Status: VALIDATED

    Source sequence(s)
    QNVO02000453
    UniProtKB/TrEMBL
    A0A1D5R9N5, H9EMQ8
    Related
    ENSMMUP00000057026.2, ENSMMUT00000064570.2
    Conserved Domains (2) summary
    pfam10779
    Location:199 → 244
    XhlA; Haemolysin XhlA
    cl17169
    Location:15 → 97
    RRM_SF; RNA recognition motif (RRM) superfamily

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041761.1 Reference Mmul_10 Primary Assembly

    Range
    84735021..85462471
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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