U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TNFSF8 TNF superfamily member 8 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 702944, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
TNFSF8provided by VGNC
Official Full Name
TNF superfamily member 8provided by VGNC
Primary source
VGNC:VGNC:112124
Locus tag
EGK_07388
See related
Ensembl:ENSMMUG00000041301
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
TNLG3A
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TNFSF8 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (27891919..27930896)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (24448265..24489426)

Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene tenascin C Neighboring gene uncharacterized LOC114672631 Neighboring gene serine/threonine-protein kinase PRP4 homolog pseudogene Neighboring gene TNF superfamily member 15

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Comparative genomic analysis of eutherian tumor necrosis factor ligand genes. Premzl M. Immunogenetics, 2016 Feb. PMID 26646413
  2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tumor necrosis factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CD8-positive, alpha-beta T cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tumor necrosis factor ligand superfamily member 8
Names
CD30 ligand
tumor necrosis factor (ligand) superfamily, member 8
tumor necrosis factor ligand 3A
tumor necrosis factor superfamily member 8

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266670.1 → NP_001253599.1  tumor necrosis factor ligand superfamily member 8

    See identical proteins and their annotated locations for NP_001253599.1

    Status: PROVISIONAL

    Source sequence(s)
    JU477903
    UniProtKB/TrEMBL
    A0A1D5RK03, A0A8J8Y7E9, G7NG35
    Related
    ENSMMUP00000060647.1, ENSMMUT00000063739.2
    Conserved Domains (1) summary
    pfam00229
    Location:113 → 230
    TNF; TNF(tumor Necrosis Factor) family

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041768.1 Reference Mmul_10 Primary Assembly

    Range
    27891919..27930896
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015116969.2 → XP_014972455.1  tumor necrosis factor ligand superfamily member 8 isoform X1

    UniProtKB/TrEMBL
    F7BXW3
    Related
    ENSMMUP00000006789.3, ENSMMUT00000007224.4
    Conserved Domains (1) summary
    cl00147
    Location:113 → 136
    TNF; Tumor Necrosis Factor; TNF superfamily members include the cytokines: TNF (TNF-alpha), LT (lymphotoxin-alpha, TNF-beta), CD40 ligand, Apo2L (TRAIL), Fas ligand, and osteoprotegerin (OPG) ligand. These proteins generally have an intracellular N-terminal ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.