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OPTC opticin [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 702570, updated on 17-Aug-2024

Summary

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Official Symbol
OPTCprovided by VGNC
Official Full Name
opticinprovided by VGNC
Primary source
VGNC:VGNC:75590
See related
Ensembl:ENSMMUG00000021640
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See OPTC in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (61005479..61015335)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (163121273..163132268, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S27-like Neighboring gene proline and arginine rich end leucine rich repeat protein Neighboring gene ATPase plasma membrane Ca2+ transporting 4 Neighboring gene ribosome biogenesis protein NSA2 homolog pseudogene Neighboring gene small nucleolar RNA SNORA77

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
opticin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    61005479..61015335
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015119816.2 → XP_014975302.2  opticin

    UniProtKB/TrEMBL
    F7DZ16, G7MEW1
    Related
    ENSMMUP00000028499.4, ENSMMUT00000030455.4
    Conserved Domains (3) summary
    PRK15370
    Location:117 → 327
    PRK15370; E3 ubiquitin-protein ligase SlrP; Provisional
    sd00033
    Location:155 → 178
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:157 → 213
    LRR_8; Leucine rich repeat
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials