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UBR4 ubiquitin protein ligase E3 component n-recognin 4 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 702449, updated on 17-Aug-2024

Summary

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Official Symbol
UBR4provided by VGNC
Official Full Name
ubiquitin protein ligase E3 component n-recognin 4provided by VGNC
Primary source
VGNC:VGNC:79845
See related
Ensembl:ENSMMUG00000006669
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See UBR4 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
109
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (205511100..205650693)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (17856110..17996131, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene aldo-keto reductase family 7 like Neighboring gene MRT4 homolog, ribosome maturation factor Neighboring gene ER membrane protein complex subunit 1 Neighboring gene uncharacterized LOC106995232 Neighboring gene uncharacterized LOC114673978 Neighboring gene uncharacterized LOC106995170 Neighboring gene intermediate filament family orphan 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase UBR4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    205511100..205650693
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015127159.2 → XP_014982645.2  E3 ubiquitin-protein ligase UBR4 isoform X1

    UniProtKB/TrEMBL
    H9Z6Z6
    Conserved Domains (3) summary
    smart00396
    Location:1660 → 1727
    ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    pfam12773
    Location:3699 → 3743
    DZR; Double zinc ribbon
    pfam13764
    Location:4406 → 5202
    E3_UbLigase_R4; E3 ubiquitin-protein ligase UBR4

  2. XM_015127400.2 → XP_014982886.2  E3 ubiquitin-protein ligase UBR4 isoform X6

    UniProtKB/TrEMBL
    H9Z6Z6
    Related
    ENSMMUP00000076780.1, ENSMMUT00000107650.1
    Conserved Domains (3) summary
    smart00396
    Location:1660 → 1727
    ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    pfam12773
    Location:3664 → 3708
    DZR; Double zinc ribbon
    pfam13764
    Location:4371 → 5167
    E3_UbLigase_R4; E3 ubiquitin-protein ligase UBR4

  3. XM_015127302.2 → XP_014982788.2  E3 ubiquitin-protein ligase UBR4 isoform X4

    UniProtKB/TrEMBL
    H9Z6Z6
    Related
    ENSMMUP00000040561.3, ENSMMUT00000047529.3
    Conserved Domains (3) summary
    smart00396
    Location:1660 → 1727
    ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    pfam12773
    Location:3671 → 3715
    DZR; Double zinc ribbon
    pfam13764
    Location:4378 → 5174
    E3_UbLigase_R4; E3 ubiquitin-protein ligase UBR4

  4. XM_015127344.2 → XP_014982830.2  E3 ubiquitin-protein ligase UBR4 isoform X5

    UniProtKB/TrEMBL
    H9Z6Z6
    Conserved Domains (3) summary
    smart00396
    Location:1660 → 1727
    ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    pfam12773
    Location:3670 → 3714
    DZR; Double zinc ribbon
    pfam13764
    Location:4377 → 5173
    E3_UbLigase_R4; E3 ubiquitin-protein ligase UBR4

  5. XM_015127242.2 → XP_014982728.2  E3 ubiquitin-protein ligase UBR4 isoform X3

    UniProtKB/TrEMBL
    H9Z6Z6
    Conserved Domains (3) summary
    smart00396
    Location:1660 → 1727
    ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    pfam12773
    Location:3688 → 3732
    DZR; Double zinc ribbon
    pfam13764
    Location:4395 → 5191
    E3_UbLigase_R4; E3 ubiquitin-protein ligase UBR4

  6. XM_015127531.2 → XP_014983017.2  E3 ubiquitin-protein ligase UBR4 isoform X8

    UniProtKB/TrEMBL
    H9Z6Z6
    Conserved Domains (3) summary
    smart00396
    Location:1660 → 1727
    ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    pfam12773
    Location:3653 → 3697
    DZR; Double zinc ribbon
    pfam13764
    Location:4360 → 5156
    E3_UbLigase_R4; E3 ubiquitin-protein ligase UBR4

  7. XM_015127200.2 → XP_014982686.2  E3 ubiquitin-protein ligase UBR4 isoform X2

    UniProtKB/TrEMBL
    H9Z6Z6
    Conserved Domains (3) summary
    smart00396
    Location:1660 → 1727
    ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    pfam12773
    Location:3698 → 3742
    DZR; Double zinc ribbon
    pfam13764
    Location:4405 → 5201
    E3_UbLigase_R4; E3 ubiquitin-protein ligase UBR4

  8. XM_015127461.2 → XP_014982947.2  E3 ubiquitin-protein ligase UBR4 isoform X7

    UniProtKB/TrEMBL
    H9Z6Z6
    Related
    ENSMMUP00000008791.4, ENSMMUT00000009356.4
    Conserved Domains (3) summary
    smart00396
    Location:1660 → 1727
    ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    pfam12773
    Location:3659 → 3703
    DZR; Double zinc ribbon
    pfam13764
    Location:4366 → 5162
    E3_UbLigase_R4; E3 ubiquitin-protein ligase UBR4

  9. XM_015127579.2 → XP_014983065.2  E3 ubiquitin-protein ligase UBR4 isoform X9

    UniProtKB/TrEMBL
    H9Z6Z6
    Conserved Domains (2) summary
    smart00396
    Location:1660 → 1727
    ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway
    pfam12773
    Location:3699 → 3743
    DZR; Double zinc ribbon
Nucleotide Protein
Heading Accession and Version

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