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BABAM2 BRISC and BRCA1 A complex member 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 702365, updated on 17-Aug-2024

Summary

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Official Symbol
BABAM2provided by VGNC
Official Full Name
BRISC and BRCA1 A complex member 2provided by VGNC
Primary source
VGNC:VGNC:70048
Locus tag
EGK_05182
See related
Ensembl:ENSMMUG00000014461
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
BRE
Orthologs
human mouse all
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Genomic context

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See BABAM2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
22
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (80610469..81179517, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (28188255..28645895)

Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114671807 Neighboring gene FOS like 2, AP-1 transcription factor subunit Neighboring gene uncharacterized LOC114671746 Neighboring gene uncharacterized LOC106992885 Neighboring gene uncharacterized LOC114671744 Neighboring gene protein FAM133B pseudogene Neighboring gene ribokinase Neighboring gene uncharacterized LOC106992883 Neighboring gene mitochondrial ribosomal protein L33

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in double-strand break repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of BRCA1-A complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of BRISC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BRISC and BRCA1-A complex member 2
Names
BRCA1-A complex subunit BRE
brain and reproductive organ-expressed (TNFRSF1A modulator)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041766.1 Reference Mmul_10 Primary Assembly

    Range
    80610469..81179517 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028831823.1 → XP_028687656.1  BRISC and BRCA1-A complex member 2 isoform X6

    UniProtKB/TrEMBL
    F7BAE7, F7BAG5
    Related
    ENSMMUP00000078369.1, ENSMMUT00000083347.1
    Conserved Domains (1) summary
    pfam06113
    Location:8 → 333
    BRE; Brain and reproductive organ-expressed protein (BRE)

  2. XM_015111988.2 → XP_014967474.1  BRISC and BRCA1-A complex member 2 isoform X1

    UniProtKB/TrEMBL
    F7BAE7
    Conserved Domains (1) summary
    pfam06113
    Location:8 → 352
    BRE; Brain and reproductive organ-expressed protein (BRE)

  3. XM_015111992.2 → XP_014967478.1  BRISC and BRCA1-A complex member 2 isoform X6

    UniProtKB/TrEMBL
    F7BAE7, F7BAG5
    Conserved Domains (1) summary
    pfam06113
    Location:8 → 333
    BRE; Brain and reproductive organ-expressed protein (BRE)

  4. XM_001100101.4 → XP_001100101.2  BRISC and BRCA1-A complex member 2 isoform X2

    See identical proteins and their annotated locations for XP_001100101.2

    UniProtKB/TrEMBL
    A0A5S6R9M3, A0A8J8Y5E2, F7BAE7, F7BAF5, G7N9Q6
    Related
    ENSMMUP00000018987.4, ENSMMUT00000020286.4
    Conserved Domains (1) summary
    pfam06113
    Location:8 → 333
    BRE; Brain and reproductive organ-expressed protein (BRE)

  5. XM_015111990.2 → XP_014967476.1  BRISC and BRCA1-A complex member 2 isoform X4

    UniProtKB/TrEMBL
    F7BAE7
    Conserved Domains (1) summary
    pfam06113
    Location:8 → 352
    BRE; Brain and reproductive organ-expressed protein (BRE)

  6. XM_015111987.2 → XP_014967473.1  BRISC and BRCA1-A complex member 2 isoform X1

    UniProtKB/TrEMBL
    F7BAE7
    Conserved Domains (1) summary
    pfam06113
    Location:8 → 352
    BRE; Brain and reproductive organ-expressed protein (BRE)

  7. XM_028831824.1 → XP_028687657.1  BRISC and BRCA1-A complex member 2 isoform X6

    UniProtKB/TrEMBL
    F7BAE7, F7BAG5
    Related
    ENSMMUP00000018988.3, ENSMMUT00000020287.4
    Conserved Domains (1) summary
    pfam06113
    Location:8 → 333
    BRE; Brain and reproductive organ-expressed protein (BRE)

  8. XM_028831821.1 → XP_028687654.1  BRISC and BRCA1-A complex member 2 isoform X2

    UniProtKB/TrEMBL
    A0A5S6R9M3, A0A8J8Y5E2, F7BAE7, F7BAF5, G7N9Q6
    Conserved Domains (1) summary
    pfam06113
    Location:8 → 333
    BRE; Brain and reproductive organ-expressed protein (BRE)

  9. XM_028831820.1 → XP_028687653.1  BRISC and BRCA1-A complex member 2 isoform X1

    UniProtKB/TrEMBL
    F7BAE7
    Conserved Domains (1) summary
    pfam06113
    Location:8 → 352
    BRE; Brain and reproductive organ-expressed protein (BRE)

  10. XM_015111989.2 → XP_014967475.1  BRISC and BRCA1-A complex member 2 isoform X3

    Conserved Domains (1) summary
    pfam06113
    Location:7 → 321
    BRE; Brain and reproductive organ-expressed protein (BRE)

  11. XM_015111993.2 → XP_014967479.1  BRISC and BRCA1-A complex member 2 isoform X8

    Conserved Domains (1) summary
    pfam06113
    Location:3 → 286
    BRE; Brain and reproductive organ-expressed protein (BRE)

  12. XM_015111991.2 → XP_014967477.1  BRISC and BRCA1-A complex member 2 isoform X5

    UniProtKB/TrEMBL
    F7BAE7
    Conserved Domains (1) summary
    pfam06113
    Location:8 → 352
    BRE; Brain and reproductive organ-expressed protein (BRE)

  13. XM_028831825.1 → XP_028687658.1  BRISC and BRCA1-A complex member 2 isoform X7

    UniProtKB/TrEMBL
    A0A5F8A5D8, F7BAE7
    Related
    ENSMMUP00000072577.1, ENSMMUT00000081037.1
    Conserved Domains (1) summary
    pfam06113
    Location:8 → 333
    BRE; Brain and reproductive organ-expressed protein (BRE)

  14. XM_015111994.2 → XP_014967480.1  BRISC and BRCA1-A complex member 2 isoform X10

    Conserved Domains (1) summary
    pfam06113
    Location:8 → 303
    BRE; Brain and reproductive organ-expressed protein (BRE)

  15. XM_028831826.1 → XP_028687659.1  BRISC and BRCA1-A complex member 2 isoform X9

    UniProtKB/TrEMBL
    F7BAE7
    Conserved Domains (1) summary
    pfam06113
    Location:8 → 330
    BRE; Brain and reproductive organ-expressed protein (BRE)

RNA

  1. XR_003721805.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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