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DUS2 dihydrouridine synthase 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 702051, updated on 17-Aug-2024

Summary

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Official Symbol
DUS2provided by VGNC
Official Full Name
dihydrouridine synthase 2provided by VGNC
Primary source
VGNC:VGNC:71908
Locus tag
EGK_12919
See related
Ensembl:ENSMMUG00000021841
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
DUS2L
Orthologs
human mouse all
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Genomic context

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See DUS2 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
21
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (55234301..55293070)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (52381776..52440849)

Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene DPEP2 neighbor Neighboring gene DEAD-box helicase 28 Neighboring gene 60S ribosomal protein L31 pseudogene Neighboring gene nuclear factor of activated T cells 3 Neighboring gene ubiquitin-conjugating enzyme E2 N-like Neighboring gene small nucleolar RNA SNORA48

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA dihydrouridine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA dihydrouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA-dihydrouridine(20) synthase [NAD(P)+]-like
Names
dihydrouridine synthase 2-like, SMM1 homolog
tRNA-dihydrouridine synthase 2-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041773.1 Reference Mmul_10 Primary Assembly

    Range
    55234301..55293070
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015126450.2 → XP_014981936.1  tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q684, A0A5F8AQ14, A0A663DFS5, A0A8J8Y2R8, F7EII2, G7NQ81
    Related
    ENSMMUP00000043550.2, ENSMMUT00000076246.2
    Conserved Domains (2) summary
    cd02801
    Location:13 → 252
    DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...
    cd19871
    Location:369 → 436
    DSRM_DUS2L; double-stranded RNA binding motif of tRNA-dihydrouridine(20) synthase [NAD(P)+]-like (DUS2L) and similar proteins

  2. XM_015126451.2 → XP_014981937.1  tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q684, A0A5F8AQ14, A0A663DFS5, A0A8J8Y2R8, F7EII2, G7NQ81
    Related
    ENSMMUP00000028759.3, ENSMMUT00000030731.4
    Conserved Domains (2) summary
    cd02801
    Location:13 → 252
    DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...
    cd19871
    Location:369 → 436
    DSRM_DUS2L; double-stranded RNA binding motif of tRNA-dihydrouridine(20) synthase [NAD(P)+]-like (DUS2L) and similar proteins

  3. XM_028841542.1 → XP_028697375.1  tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q684, A0A5F8AQ14, A0A663DFS5, A0A8J8Y2R8, F7EII2, G7NQ81
    Related
    ENSMMUP00000072965.1, ENSMMUT00000108605.1
    Conserved Domains (2) summary
    cd02801
    Location:13 → 252
    DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...
    cd19871
    Location:369 → 436
    DSRM_DUS2L; double-stranded RNA binding motif of tRNA-dihydrouridine(20) synthase [NAD(P)+]-like (DUS2L) and similar proteins

  4. XM_028841544.1 → XP_028697377.1  tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X3

    UniProtKB/TrEMBL
    A0A1D5QA19, A0A5F8AQ14
    Related
    ENSMMUP00000044887.2, ENSMMUT00000070680.2
    Conserved Domains (2) summary
    cd00048
    Location:321 → 385
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
    cd02801
    Location:7 → 204
    DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...

  5. XM_028841543.1 → XP_028697376.1  tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X2

    UniProtKB/TrEMBL
    A0A5F8AQ14
    Conserved Domains (2) summary
    cd00048
    Location:343 → 407
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
    cd02801
    Location:4 → 226
    DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...

RNA

  1. XR_001441781.2 RNA Sequence

  2. XR_003725625.1 RNA Sequence

Nucleotide Protein
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