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CNOT9 CCR4-NOT transcription complex subunit 9 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 701978, updated on 17-Aug-2024

Summary

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Official Symbol
CNOT9provided by VGNC
Official Full Name
CCR4-NOT transcription complex subunit 9provided by VGNC
Primary source
VGNC:VGNC:71165
Locus tag
EGK_04796
See related
Ensembl:ENSMMUG00000009626
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CNOT9 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (105996442..106027686)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (100686652..100718012)

Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene CTD small phosphatase 1 Neighboring gene microRNA mir-26b Neighboring gene villin 1 Neighboring gene ubiquitin specific peptidase 37 Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA U3 Neighboring gene phospholipase C delta 4 Neighboring gene zinc finger protein 142 Neighboring gene BCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CCR4-NOT complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of CCR4-NOT core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CCR4-NOT transcription complex subunit 9
Names
cell differentiation protein RCD1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041765.1 Reference Mmul_10 Primary Assembly

    Range
    105996442..106027686
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015111059.2 → XP_014966545.1  CCR4-NOT transcription complex subunit 9 isoform X1

    UniProtKB/TrEMBL
    A0A1D5RJG7, A0A8J8XNV8, G7N8X3, H9FJD9
    Related
    ENSMMUP00000060461.1, ENSMMUT00000071695.2
    Conserved Domains (1) summary
    pfam04078
    Location:25 → 283
    Rcd1; Cell differentiation family, Rcd1-like

  2. XM_015111060.2 → XP_014966546.1  CCR4-NOT transcription complex subunit 9 isoform X2

    UniProtKB/TrEMBL
    F6U8W4, H9FJD9
    Related
    ENSMMUP00000026836.3, ENSMMUT00000028682.4
    Conserved Domains (1) summary
    pfam04078
    Location:25 → 244
    Rcd1; Cell differentiation family, Rcd1-like

  3. XM_015111061.2 → XP_014966547.1  CCR4-NOT transcription complex subunit 9 isoform X3

    UniProtKB/TrEMBL
    H9FJD9
    Conserved Domains (1) summary
    pfam04078
    Location:1 → 229
    Rcd1; Cell differentiation family, Rcd1-like
Nucleotide Protein
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