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VPS8 VPS8 subunit of CORVET complex [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 701567, updated on 17-Aug-2024

Summary

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Official Symbol
VPS8provided by VGNC
Official Full Name
VPS8 subunit of CORVET complexprovided by VGNC
Primary source
VGNC:VGNC:79779
See related
Ensembl:ENSMMUG00000000425
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See VPS8 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
50
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (90119489..90364591)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (107979403..108224240, complement)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114676138 Neighboring gene MAGE family member F1 Neighboring gene chromosome 2 C3orf70 homolog Neighboring gene small nucleolar RNA SNORD43

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endosomal vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein targeting to vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CORVET complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of HOPS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuolar protein sorting-associated protein 8 homolog
Names
VPS8, CORVET complex subunit
vacuolar protein sorting 8 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    90119489..90364591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028843908.1 → XP_028699741.1  vacuolar protein sorting-associated protein 8 homolog isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZRL4
    Conserved Domains (4) summary
    sd00039
    Location:202 → 239
    7WD40; WD40 repeat [structural motif]
    cd16687
    Location:1256 → 1310
    RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
    pfam12816
    Location:614 → 796
    Vps8; Golgi CORVET complex core vacuolar protein 8
    cl29593
    Location:197 → 298
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_028843910.1 → XP_028699743.1  vacuolar protein sorting-associated protein 8 homolog isoform X5

    UniProtKB/TrEMBL
    A0A5F7ZRL4
    Conserved Domains (4) summary
    sd00039
    Location:202 → 239
    7WD40; WD40 repeat [structural motif]
    cd16687
    Location:1256 → 1310
    RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
    pfam12816
    Location:614 → 796
    Vps8; Golgi CORVET complex core vacuolar protein 8
    cl29593
    Location:197 → 298
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_001097319.4 → XP_001097319.2  vacuolar protein sorting-associated protein 8 homolog isoform X3

    UniProtKB/TrEMBL
    A0A5F7ZRL4, F7ACL5, H9ESL9
    Related
    ENSMMUP00000000575.4, ENSMMUT00000000624.4
    Conserved Domains (4) summary
    sd00039
    Location:202 → 239
    7WD40; WD40 repeat [structural motif]
    cd16687
    Location:1256 → 1310
    RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
    pfam12816
    Location:614 → 796
    Vps8; Golgi CORVET complex core vacuolar protein 8
    cl29593
    Location:197 → 298
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_001097106.4 → XP_001097106.2  vacuolar protein sorting-associated protein 8 homolog isoform X4

    UniProtKB/TrEMBL
    A0A1D5QZ39, A0A5F7ZRL4, A0A5S6R6T2, A0A8J8Y2L6, G7MJ44
    Related
    ENSMMUP00000053321.2, ENSMMUT00000074179.2
    Conserved Domains (4) summary
    sd00039
    Location:200 → 237
    7WD40; WD40 repeat [structural motif]
    cd16687
    Location:1254 → 1308
    RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
    pfam12816
    Location:612 → 794
    Vps8; Golgi CORVET complex core vacuolar protein 8
    cl29593
    Location:195 → 296
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  5. XM_028843909.1 → XP_028699742.1  vacuolar protein sorting-associated protein 8 homolog isoform X2

    UniProtKB/TrEMBL
    A0A5F7ZRL4
    Conserved Domains (4) summary
    sd00039
    Location:200 → 237
    7WD40; WD40 repeat [structural motif]
    cd16687
    Location:1254 → 1308
    RING-H2_Vps8; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 8 (Vps8) and similar proteins
    pfam12816
    Location:612 → 794
    Vps8; Golgi CORVET complex core vacuolar protein 8
    cl29593
    Location:195 → 296
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
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