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ZFHX4 zinc finger homeobox 4 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 701524, updated on 17-Aug-2024

Summary

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Official Symbol
ZFHX4provided by VGNC
Official Full Name
zinc finger homeobox 4provided by VGNC
Primary source
VGNC:VGNC:79902
See related
Ensembl:ENSMMUG00000019414
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ZFHX4 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (77166914..77355352)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (74913040..75101621)

Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114680278 Neighboring gene 39S ribosomal protein L9, mitochondrial pseudogene Neighboring gene uncharacterized LOC106999820 Neighboring gene uncharacterized LOC106999821 Neighboring gene peroxisomal biogenesis factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger homeobox protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041761.1 Reference Mmul_10 Primary Assembly

    Range
    77166914..77355352
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015145599.2 → XP_015001085.1  zinc finger homeobox protein 4 isoform X1

    UniProtKB/TrEMBL
    F6RGC8, G7MZL2
    Related
    ENSMMUP00000025515.3, ENSMMUT00000027274.4
    Conserved Domains (7) summary
    smart00389
    Location:2129 → 2184
    HOX; Homeodomain
    COG3147
    Location:2318 → 2443
    DedD; Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning]
    COG5576
    Location:2541 → 2663
    COG5576; Homeodomain-containing transcription factor [Transcription]
    sd00017
    Location:1543 → 1567
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:1399 → 1419
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00046
    Location:2228 → 2282
    Homeobox; Homeobox domain
    NF033838
    Location:2392 → 2473
    PspC_subgroup_1; pneumococcal surface protein PspC, choline-binding form

  2. XM_015145600.2 → XP_015001086.1  zinc finger homeobox protein 4 isoform X2

    UniProtKB/TrEMBL
    G7MZL2
    Conserved Domains (7) summary
    smart00389
    Location:2103 → 2158
    HOX; Homeodomain
    COG3147
    Location:2292 → 2417
    DedD; Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning]
    COG5576
    Location:2515 → 2637
    COG5576; Homeodomain-containing transcription factor [Transcription]
    sd00017
    Location:1517 → 1541
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:1373 → 1393
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00046
    Location:2202 → 2256
    Homeobox; Homeobox domain
    NF033838
    Location:2366 → 2447
    PspC_subgroup_1; pneumococcal surface protein PspC, choline-binding form
Nucleotide Protein
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