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FABP5 fatty acid binding protein 5 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 701009, updated on 5-Mar-2024

Summary

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Gene symbol
FABP5
Gene description
fatty acid binding protein 5
Locus tag
EGK_19073
See related
Ensembl:ENSMMUG00000064718
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See FABP5 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (81755423..81759884)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (79547611..79552071)

Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene phosphoprotein membrane anchor with glycosphingolipid microdomains 1 Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene uncharacterized LOC106999829 Neighboring gene peripheral myelin protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cellular localization of epidermal-type and brain-type fatty acid-binding proteins in adult hippocampus and their response to cerebral ischemia. Ma D, et al. Hippocampus, 2010 Jul. PMID 19623607
  2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  3. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. polyunsaturated fatty acids, such as docosahexaenoic acid, may act via FABP5 or 7 to regulate adult postischemic hippocampal neuronal antiapoptosis or neurogenesis in primates.
    Title: Cellular localization of epidermal-type and brain-type fatty acid-binding proteins in adult hippocampus and their response to cerebral ischemia.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fatty acid-binding protein 5
Names
Epidermal-type fatty acid-binding protein
fatty acid-binding protein, epidermal

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001260789.2 → NP_001247718.1  fatty acid-binding protein 5

    See identical proteins and their annotated locations for NP_001247718.1

    Status: PROVISIONAL

    Source sequence(s)
    JV045713
    UniProtKB/TrEMBL
    A0A8J8YP38, F6YIY5, G7MZM5
    Related
    ENSMMUP00000079581.1, ENSMMUT00000094607.1
    Conserved Domains (1) summary
    cd19468
    Location:6 → 133
    FABP5; fatty acid binding protein 5

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041761.1 Reference Mmul_10 Primary Assembly

    Range
    81755423..81759884
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028852174.1 → XP_028708007.1  fatty acid-binding protein 5 isoform X1

  2. XM_028852175.1 → XP_028708008.1  fatty acid-binding protein 5 isoform X3

  3. XM_015145520.2 → XP_015001006.1  fatty acid-binding protein 5 isoform X2

    UniProtKB/TrEMBL
    A0A1D5Q399
    Conserved Domains (1) summary
    cl10502
    Location:20 → 125
    lipocalin_FABP; lipocalin/cytosolic fatty acid-binding protein family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.