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XRN2 5'-3' exoribonuclease 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 700934, updated on 17-Aug-2024

Summary

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Official Symbol
XRN2provided by VGNC
Official Full Name
5'-3' exoribonuclease 2provided by VGNC
Primary source
VGNC:VGNC:78814
See related
Ensembl:ENSMMUG00000011405
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See XRN2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
31
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (45129188..45217388, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (54434944..54522910)

Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107000508 Neighboring gene NK2 homeobox 4 Neighboring gene uncharacterized LOC114670434 Neighboring gene uncharacterized LOC107000507 Neighboring gene kizuna centrosomal protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-3' RNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear-transcribed mRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5'-3' exoribonuclease 2
XP_015005073.1
XP_015005074.2
XP_015005075.1
XP_028683965.1
XP_028683966.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041763.1 Reference Mmul_10 Primary Assembly

    Range
    45129188..45217388 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015149587.2 → XP_015005073.1  5'-3' exoribonuclease 2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5QBM0, F6VZ85, G7N332, H9FRE3
    Related
    ENSMMUP00000045439.2, ENSMMUT00000056267.2
    Conserved Domains (1) summary
    cl27292
    Location:1 → 787
    XRN_N; XRN 5'-3' exonuclease N-terminus

  2. XM_015149588.2 → XP_015005074.2  5'-3' exoribonuclease 2 isoform X2

    UniProtKB/TrEMBL
    A0A5F7Z8G3, A0A5K1UWP0
    Related
    ENSMMUP00000014968.4, ENSMMUT00000015973.4
    Conserved Domains (1) summary
    COG5049
    Location:138 → 773
    XRN1; 5'-3' exonuclease [Replication, recombination and repair]

  3. XM_028828133.1 → XP_028683966.1  5'-3' exoribonuclease 2 isoform X4

    UniProtKB/TrEMBL
    G7N332
    Conserved Domains (1) summary
    COG5049
    Location:1 → 711
    XRN1; 5'-3' exonuclease [Replication, recombination and repair]

  4. XM_028828132.1 → XP_028683965.1  5'-3' exoribonuclease 2 isoform X3

    UniProtKB/TrEMBL
    G7N332
    Conserved Domains (1) summary
    COG5049
    Location:1 → 733
    XRN1; 5'-3' exonuclease [Replication, recombination and repair]

  5. XM_015149589.2 → XP_015005075.1  5'-3' exoribonuclease 2 isoform X3

    UniProtKB/TrEMBL
    G7N332
    Conserved Domains (1) summary
    COG5049
    Location:1 → 733
    XRN1; 5'-3' exonuclease [Replication, recombination and repair]
Nucleotide Protein
Heading Accession and Version

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