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BCL9 BCL9 transcription coactivator [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 700800, updated on 17-Aug-2024

Summary

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Official Symbol
BCL9provided by VGNC
Official Full Name
BCL9 transcription coactivatorprovided by VGNC
Primary source
VGNC:VGNC:70041
Locus tag
EGK_01195
See related
Ensembl:ENSMMUG00000016786
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See BCL9 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (102478863..102568108, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (122390347..122479332)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene gap junction protein alpha 5 Neighboring gene acid phosphatase 6, lysophosphatidic Neighboring gene transcription elongation factor A protein-like 8 Neighboring gene olfactory receptor 5V1-like Neighboring gene olfactory receptor 5V1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-catenin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of beta-catenin-TCF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
B-cell CLL/lymphoma 9 protein
Names
B cell CLL/lymphoma 9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001261320.1 → NP_001248249.1  B-cell CLL/lymphoma 9 protein

    See identical proteins and their annotated locations for NP_001248249.1

    Status: PROVISIONAL

    Source sequence(s)
    JV047863
    UniProtKB/TrEMBL
    A0A8J8XAC9, F7D4Z2, G7MG41
    Related
    ENSMMUP00000022067.2, ENSMMUT00000023584.4
    Conserved Domains (2) summary
    PHA03247
    Location:571 → 1186
    PHA03247; large tegument protein UL36; Provisional
    pfam11502
    Location:350 → 388
    BCL9; B-cell lymphoma 9 protein

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    102478863..102568108 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015149498.2 → XP_015004984.1  B-cell CLL/lymphoma 9 protein isoform X3

    Conserved Domains (1) summary
    pfam11502
    Location:276 → 314
    BCL9; B-cell lymphoma 9 protein

  2. XM_015149493.2 → XP_015004979.1  B-cell CLL/lymphoma 9 protein isoform X2

    Conserved Domains (1) summary
    pfam11502
    Location:350 → 388
    BCL9; B-cell lymphoma 9 protein

  3. XM_028835532.1 → XP_028691365.1  B-cell CLL/lymphoma 9 protein isoform X1

    UniProtKB/TrEMBL
    A0A8J8XAC9, F7D4Z2, G7MG41
    Conserved Domains (2) summary
    PHA03247
    Location:571 → 1186
    PHA03247; large tegument protein UL36; Provisional
    pfam11502
    Location:350 → 388
    BCL9; B-cell lymphoma 9 protein

  4. XM_015149484.2 → XP_015004970.1  B-cell CLL/lymphoma 9 protein isoform X1

    UniProtKB/TrEMBL
    A0A8J8XAC9, F7D4Z2, G7MG41
    Conserved Domains (2) summary
    PHA03247
    Location:571 → 1186
    PHA03247; large tegument protein UL36; Provisional
    pfam11502
    Location:350 → 388
    BCL9; B-cell lymphoma 9 protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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