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CAPS calcyphosine [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 700767, updated on 17-Aug-2024

Summary

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Official Symbol
CAPSprovided by VGNC
Official Full Name
calcyphosineprovided by VGNC
Primary source
VGNC:VGNC:108145
See related
Ensembl:ENSMMUG00000011963
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human all
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Genomic context

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See CAPS in Genome Data Viewer
Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (5845213..5855514)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (6081215..6083880)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat extensin-like protein 5 Neighboring gene NADH:ubiquinone oxidoreductase subunit A11 Neighboring gene vimentin type intermediate filament associated coiled-coil protein Neighboring gene RAN binding protein 3 Neighboring gene uncharacterized LOC114673963

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcyphosin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    5845213..5855514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028838618.1 → XP_028694451.1  calcyphosin isoform X2

    UniProtKB/TrEMBL
    F7HI93, H9G0C8
    Related
    ENSMMUP00000015685.4, ENSMMUT00000016750.4
    Conserved Domains (2) summary
    PTZ00184
    Location:23 → 162
    PTZ00184; calmodulin; Provisional
    cd00051
    Location:26 → 87
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  2. XM_028838617.1 → XP_028694450.1  calcyphosin isoform X2

    UniProtKB/TrEMBL
    F7HI93, H9G0C8
    Conserved Domains (2) summary
    PTZ00184
    Location:23 → 162
    PTZ00184; calmodulin; Provisional
    cd00051
    Location:26 → 87
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  3. XM_028838616.1 → XP_028694449.1  calcyphosin isoform X1

    UniProtKB/TrEMBL
    H9G0C8
    Conserved Domains (2) summary
    PTZ00184
    Location:70 → 209
    PTZ00184; calmodulin; Provisional
    cd00051
    Location:73 → 134
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
Nucleotide Protein
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