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ARID3C AT-rich interaction domain 3C [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 700584, updated on 17-Aug-2024

Summary

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Official Symbol
ARID3Cprovided by VGNC
Official Full Name
AT-rich interaction domain 3Cprovided by VGNC
Primary source
VGNC:VGNC:69876
See related
Ensembl:ENSMMUG00000020786
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ARID3C in Genome Data Viewer
Location:
chromosome: 15
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (49575855..49582855)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (49639155..49646613)

Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene galactose-1-phosphate uridylyltransferase Neighboring gene sigma non-opioid intracellular receptor 1 Neighboring gene uncharacterized LOC114672768 Neighboring gene dynactin subunit 3 Neighboring gene ribonuclease P/MRP subunit p25 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AT-rich interactive domain-containing protein 3C
Names
AT rich interactive domain 3C (BRIGHT-like)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041768.1 Reference Mmul_10 Primary Assembly

    Range
    49575855..49582855
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001096190.3 → XP_001096190.2  AT-rich interactive domain-containing protein 3C

    UniProtKB/TrEMBL
    F7HA39, G7NFL3
    Related
    ENSMMUP00000027359.2, ENSMMUT00000029240.3
    Conserved Domains (2) summary
    PHA03307
    Location:229 → 360
    PHA03307; transcriptional regulator ICP4; Provisional
    cl28902
    Location:100 → 226
    ARID; ARID/BRIGHT DNA binding domain family
Nucleotide Protein
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