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CYC1 cytochrome c1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 700518, updated on 18-Sep-2024

Summary

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Official Symbol
CYC1provided by VGNC
Official Full Name
cytochrome c1provided by VGNC
Primary source
VGNC:VGNC:71577
See related
Ensembl:ENSMMUG00000007149
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CYC1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (144372508..144375470)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (143332426..143335393)

Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene exosome component 4 Neighboring gene glycosylphosphatidylinositol anchor attachment 1 Neighboring gene SHANK associated RH domain interactor Neighboring gene MAF1 homolog, negative regulator of RNA polymerase III

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial electron transport, ubiquinol to cytochrome c IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytochrome c1, heme protein, mitochondrial
Names
cytochrome c-1
NP_001180790.1
XP_028708002.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001193861.2 → NP_001180790.1  cytochrome c1, heme protein, mitochondrial

    See identical proteins and their annotated locations for NP_001180790.1

    Status: VALIDATED

    Source sequence(s)
    QNVO02000454
    UniProtKB/TrEMBL
    F7DMP6, H9F485
    Related
    ENSMMUP00000009366.1, ENSMMUT00000009980.3
    Conserved Domains (2) summary
    COG2857
    Location:84 → 315
    CYT1; Cytochrome c1 [Energy production and conversion]
    pfam02167
    Location:96 → 314
    Cytochrom_C1; Cytochrome C1 family

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041761.1 Reference Mmul_10 Primary Assembly

    Range
    144372508..144375470
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028852169.1 → XP_028708002.1  cytochrome c1, heme protein, mitochondrial isoform X1

    UniProtKB/TrEMBL
    H9F485
    Conserved Domains (1) summary
    pfam02167
    Location:37 → 253
    Cytochrom_C1; Cytochrome C1 family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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