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SNX2 sorting nexin 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 700507, updated on 17-Aug-2024

Summary

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Official Symbol
SNX2provided by VGNC
Official Full Name
sorting nexin 2provided by VGNC
Primary source
VGNC:VGNC:77682
See related
Ensembl:ENSMMUG00000023598
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See SNX2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
17
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (120276713..120337676)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (120156002..120209293)

Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene synuclein alpha interacting protein Neighboring gene uncharacterized LOC114678887 Neighboring gene arginine-fifty homeobox-like Neighboring gene small nucleolar RNA U13 Neighboring gene sorting nexin 24 Neighboring gene cytochrome c oxidase assembly factor 3 homolog, mitochondrial pseudogene Neighboring gene peptidylprolyl isomerase C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in early endosome to Golgi transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of retromer complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorting nexin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001260897.1 → NP_001247826.1  sorting nexin-2

    See identical proteins and their annotated locations for NP_001247826.1

    Status: PROVISIONAL

    Source sequence(s)
    JV043696
    UniProtKB/TrEMBL
    A0A5F8AK91, G7MTV0
    Related
    ENSMMUP00000078261.1, ENSMMUT00000098617.1
    Conserved Domains (3) summary
    cd07282
    Location:142 → 265
    PX_SNX2; The phosphoinositide binding Phox Homology domain of Sorting Nexin 2
    cd07664
    Location:283 → 516
    BAR_SNX2; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 2
    pfam03700
    Location:3 → 75
    Sorting_nexin; Sorting nexin, N-terminal domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041759.1 Reference Mmul_10 Primary Assembly

    Range
    120276713..120337676
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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