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OGG1 8-oxoguanine DNA glycosylase [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 700481, updated on 3-Dec-2024

Summary

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Official Symbol
OGG1provided by VGNC
Official Full Name
8-oxoguanine DNA glycosylaseprovided by VGNC
Primary source
VGNC:VGNC:75581
See related
Ensembl:ENSMMUG00000006117
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See OGG1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
22
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (141089782..141128548)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (56619826..56659407, complement)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene copine family member 9 Neighboring gene bromodomain and PHD finger containing 1 Neighboring gene calcium/calmodulin dependent protein kinase I Neighboring gene transcriptional adaptor 3 Neighboring gene actin related protein 2/3 complex subunit 4 Neighboring gene tubulin tyrosine ligase like 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 8-oxo-7,8-dihydroguanine DNA N-glycosylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in base-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in base-excision repair, AP site formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-glycosylase/DNA lyase
XP_014985750.2
XP_014985751.2
XP_014985752.2
XP_014985754.1
XP_014985756.1
XP_028698997.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001434451.1 → NP_001421380.1  N-glycosylase/DNA lyase isoform 1

    Status: VALIDATED

    Source sequence(s)
    QNVO02000283

  2. NM_001434452.1 → NP_001421381.1  N-glycosylase/DNA lyase isoform 2

    Status: VALIDATED

    Source sequence(s)
    QNVO02000283
    UniProtKB/TrEMBL
    A0A5F8AEV4, H9EX73

  3. NM_001434453.1 → NP_001421382.1  N-glycosylase/DNA lyase isoform 3

    Status: VALIDATED

    Source sequence(s)
    QNVO02000283
    UniProtKB/TrEMBL
    F7GY42, H9EX73

  4. NM_001434454.1 → NP_001421383.1  N-glycosylase/DNA lyase isoform 4

    Status: VALIDATED

    Source sequence(s)
    QNVO02000283
    UniProtKB/TrEMBL
    F7GWH5, H9EX73

  5. NM_001434455.1 → NP_001421384.1  N-glycosylase/DNA lyase isoform 5

    Status: VALIDATED

    Source sequence(s)
    QNVO02000283
    UniProtKB/TrEMBL
    A0A5F8A8M5, H9EX73

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    141089782..141128548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028843164.1 → XP_028698997.1  N-glycosylase/DNA lyase isoform X4

    UniProtKB/TrEMBL
    F7B0C2, H9EX73
    Related
    ENSMMUP00000008042.4, ENSMMUT00000008555.4
    Conserved Domains (1) summary
    TIGR00588
    Location:11 → 316
    ogg; 8-oxoguanine DNA-glycosylase (ogg)

  2. XM_015130266.2 → XP_014985752.2  N-glycosylase/DNA lyase isoform X3

    Related
    ENSMMUP00000074224.1, ENSMMUT00000083927.1
    Conserved Domains (1) summary
    TIGR00588
    Location:11 → 317
    ogg; 8-oxoguanine DNA-glycosylase (ogg)

  3. XM_015130264.2 → XP_014985750.2  N-glycosylase/DNA lyase isoform X1

    Conserved Domains (2) summary
    TIGR00588
    Location:11 → 317
    ogg; 8-oxoguanine DNA-glycosylase (ogg)
    PHA03247
    Location:316 → 391
    PHA03247; large tegument protein UL36; Provisional

  4. XM_015130265.2 → XP_014985751.2  N-glycosylase/DNA lyase isoform X2

    Conserved Domains (2) summary
    TIGR00588
    Location:14 → 292
    ogg; 8-oxoguanine DNA-glycosylase (ogg)
    PHA03247
    Location:291 → 366
    PHA03247; large tegument protein UL36; Provisional

  5. XM_015130270.2 → XP_014985756.1  N-glycosylase/DNA lyase isoform X6

    Conserved Domains (1) summary
    TIGR00588
    Location:11 → 189
    ogg; 8-oxoguanine DNA-glycosylase (ogg)

  6. XM_015130268.2 → XP_014985754.1  N-glycosylase/DNA lyase isoform X5

    Conserved Domains (1) summary
    TIGR00588
    Location:11 → 189
    ogg; 8-oxoguanine DNA-glycosylase (ogg)

RNA

  1. XR_001442914.2 RNA Sequence

    Related
    ENSMMUT00000046699.3

  2. XR_001442913.2 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001260579.1: Suppressed sequence

    Description
    NM_001260579.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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