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GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 700421, updated on 17-Aug-2024

Summary

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Official Symbol
GGA2provided by VGNC
Official Full Name
golgi associated, gamma adaptin ear containing, ARF binding protein 2provided by VGNC
Primary source
VGNC:VGNC:72728
See related
Ensembl:ENSMMUG00000020521
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See GGA2 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
17
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (21809960..21856962, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (22170721..22216960, complement)

Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene sodium channel epithelial 1 subunit beta Neighboring gene component of oligomeric golgi complex 7 Neighboring gene glutamyl-tRNA synthetase 2, mitochondrial Neighboring gene ubiquitin family domain containing 1 Neighboring gene NADH:ubiquinone oxidoreductase subunit AB1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor-binding protein GGA2
Names
ADP-ribosylation factor binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041773.1 Reference Mmul_10 Primary Assembly

    Range
    21809960..21856962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015125797.2 → XP_014981283.1  ADP-ribosylation factor-binding protein GGA2

    UniProtKB/TrEMBL
    F7AF85, H9F5D9, I2CWP8
    Related
    ENSMMUP00000027026.4, ENSMMUT00000028881.4
    Conserved Domains (4) summary
    smart00809
    Location:494 → 608
    Alpha_adaptinC2; Adaptin C-terminal domain
    cd17010
    Location:29 → 166
    VHS_GGA2; VHS (Vps27/Hrs/STAM) domain of ADP-ribosylation factor-binding protein GGA2
    pfam18308
    Location:188 → 227
    GGA_N-GAT; GGA N-GAT domain
    cl03906
    Location:230 → 317
    GAT_SF; GAT domain found in eukaryotic GGAs, metazoan Tom1-like proteins, metazoan STAMs, fungal Vps27, and similar proteins
Nucleotide Protein
Heading Accession and Version

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