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LTV1 LTV1 ribosome biogenesis factor [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 700231, updated on 17-Aug-2024

Summary

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Official Symbol
LTV1provided by VGNC
Official Full Name
LTV1 ribosome biogenesis factorprovided by VGNC
Primary source
VGNC:VGNC:83430
See related
Ensembl:ENSMMUG00000005348
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See LTV1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (47629889..47649295)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (123248538..123267947, complement)

Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106998095 Neighboring gene alpha-L-fucosidase 2 Neighboring gene phosphatase and actin regulator 2 Neighboring gene uncharacterized LOC106998094 Neighboring gene zinc finger C2HC-type containing 1B Neighboring gene PLAG1 like zinc finger 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ribosomal small subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal small subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, small subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein LTV1 homolog
Names
LTV1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041757.1 Reference Mmul_10 Primary Assembly

    Range
    47629889..47649295
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001089761.4 → XP_001089761.2  protein LTV1 homolog

    UniProtKB/TrEMBL
    F7GED3, G7MQ74, H9EWQ8
    Related
    ENSMMUP00000007075.4, ENSMMUT00000007529.4
    Conserved Domains (1) summary
    pfam04180
    Location:15 → 445
    LTV; Low temperature viability protein
Nucleotide Protein
Heading Accession and Version

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