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COLEC12 collectin subfamily member 12 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 700031, updated on 17-Aug-2024

Summary

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Official Symbol
COLEC12provided by VGNC
Official Full Name
collectin subfamily member 12provided by VGNC
Primary source
VGNC:VGNC:71181
See related
Ensembl:ENSMMUG00000004663
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See COLEC12 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 18 NC_041771.1 (61632260..61816771, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 18 NC_027910.1 (9069138..9231512)

Chromosome 18 - NC_041771.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 14 Neighboring gene THO complex subunit 1 Neighboring gene uncharacterized LOC106994438 Neighboring gene centrin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables low-density lipoprotein particle binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pattern recognition receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collectin-12
Names
collectin sub-family member 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041771.1 Reference Mmul_10 Primary Assembly

    Range
    61632260..61816771 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028838240.1 → XP_028694073.1  collectin-12

    UniProtKB/TrEMBL
    G7NKF8
    Related
    ENSMMUP00000006201.4, ENSMMUT00000006592.4
    Conserved Domains (2) summary
    cd03590
    Location:607 → 732
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    COG1196
    Location:77 → 350
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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