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ALX1 ALX homeobox 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 700027, updated on 5-Mar-2024

Summary

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Gene symbol
ALX1
Gene description
ALX homeobox 1
See related
Ensembl:ENSMMUG00000016535
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
CART1
Orthologs
human mouse all
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Genomic context

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See ALX1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (84895182..84918144)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (84456420..84478326)

Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 19 Neighboring gene leucine rich repeats and IQ motif containing 1 Neighboring gene RNA-binding protein 3 Neighboring gene uncharacterized LOC114671069

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in embryonic skeletal system morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ALX homeobox protein 1
Names
ALX homeobox protein 1-like
cartilage paired-class homeoprotein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041764.1 Reference Mmul_10 Primary Assembly

    Range
    84895182..84918144
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015152375.2 → XP_015007861.1  ALX homeobox protein 1

    UniProtKB/TrEMBL
    A0A5F7ZQC5, G7N7S3
    Related
    ENSMMUP00000067828.1, ENSMMUT00000093410.1
    Conserved Domains (2) summary
    pfam00046
    Location:135 → 189
    Homeobox; Homeobox domain
    pfam03826
    Location:302 → 320
    OAR; OAR domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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