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CLPP caseinolytic mitochondrial matrix peptidase proteolytic subunit [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 699593, updated on 17-Aug-2024

Summary

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Official Symbol
CLPPprovided by VGNC
Official Full Name
caseinolytic mitochondrial matrix peptidase proteolytic subunitprovided by VGNC
Primary source
VGNC:VGNC:71263
See related
Ensembl:ENSMMUG00000028914
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CLPP in Genome Data Viewer
Location:
chromosome: 19
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (6293214..6302362)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (6557306..6566832)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase bubblegum family member 2 Neighboring gene uncharacterized LOC106994618 Neighboring gene uncharacterized LOC701983 Neighboring gene MLLT1 super elongation complex subunit Neighboring gene alkaline ceramidase 1 Neighboring gene uncharacterized LOC114674142 Neighboring gene alkB homolog 7 Neighboring gene general transcription factor IIF subunit 1 Neighboring gene persephin Neighboring gene microRNA mir-6790

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP-dependent peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein quality control for misfolded or incompletely synthesized proteins IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of endopeptidase Clp complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: ATP-dependent Clp protease proteolytic subunit, mitochondrial
Names
ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog
putative ATP-dependent Clp protease proteolytic subunit, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    6293214..6302362
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028839865.1 → XP_028695698.1  LOW QUALITY PROTEIN: ATP-dependent Clp protease proteolytic subunit, mitochondrial

    UniProtKB/TrEMBL
    F6YQ20
    Related
    ENSMMUP00000031933.3, ENSMMUT00000038852.3
    Conserved Domains (1) summary
    PRK00277
    Location:55 → 250
    clpP; ATP-dependent Clp protease proteolytic subunit; Reviewed
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials