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NEDD9 neural precursor cell expressed, developmentally down-regulated 9 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 699359, updated on 17-Aug-2024

Summary

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Official Symbol
NEDD9provided by VGNC
Official Full Name
neural precursor cell expressed, developmentally down-regulated 9provided by VGNC
Primary source
VGNC:VGNC:75304
See related
Ensembl:ENSMMUG00000016135
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See NEDD9 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (158623840..158824365)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (11382626..11583088, complement)

Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 170B Neighboring gene U1 spliceosomal RNA Neighboring gene uncharacterized LOC114677708 Neighboring gene small integral membrane protein 13 Neighboring gene endogenous retrovirus group FRD member 1, envelope Neighboring gene uncharacterized LOC106997790 Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
enhancer of filamentation 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041757.1 Reference Mmul_10 Primary Assembly

    Range
    158623840..158824365
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001088846.4 → XP_001088846.2  enhancer of filamentation 1 isoform X2

    UniProtKB/TrEMBL
    A0A1D5Q6P5, A0A1D5QRF9
    Related
    ENSMMUP00000050637.2, ENSMMUT00000066301.2
    Conserved Domains (3) summary
    cd11550
    Location:401 → 562
    Serine_rich_NEDD9; Serine rich Four helix bundle domain of CAS (Crk-Associated Substrate) scaffolding protein, Neural precursor cell Expressed, Developmentally Down-regulated 9; a protein interaction module
    cd12002
    Location:7 → 63
    SH3_NEDD9; Src homology 3 domain of CAS (Crk-Associated Substrate) scaffolding protein family member, Neural precursor cell Expressed, Developmentally Down-regulated 9
    pfam12026
    Location:621 → 828
    DUF3513; Domain of unknown function (DUF3513)

  2. XM_015135537.2 → XP_014991023.2  enhancer of filamentation 1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5Q6P5
    Conserved Domains (2) summary
    cd11550
    Location:252 → 413
    Serine_rich_NEDD9; Serine rich Four helix bundle domain of CAS (Crk-Associated Substrate) scaffolding protein, Neural precursor cell Expressed, Developmentally Down-regulated 9; a protein interaction module
    pfam12026
    Location:472 → 679
    DUF3513; Domain of unknown function (DUF3513)

  3. XM_001089291.4 → XP_001089291.2  enhancer of filamentation 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q6P5, F7FQI6
    Related
    ENSMMUP00000021222.3, ENSMMUT00000022684.4
    Conserved Domains (3) summary
    cd11550
    Location:401 → 562
    Serine_rich_NEDD9; Serine rich Four helix bundle domain of CAS (Crk-Associated Substrate) scaffolding protein, Neural precursor cell Expressed, Developmentally Down-regulated 9; a protein interaction module
    cd12002
    Location:7 → 63
    SH3_NEDD9; Src homology 3 domain of CAS (Crk-Associated Substrate) scaffolding protein family member, Neural precursor cell Expressed, Developmentally Down-regulated 9
    pfam12026
    Location:621 → 828
    DUF3513; Domain of unknown function (DUF3513)
Nucleotide Protein
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