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ACER1 alkaline ceramidase 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 699093, updated on 17-Aug-2024

Summary

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Official Symbol
ACER1provided by VGNC
Official Full Name
alkaline ceramidase 1provided by VGNC
Primary source
VGNC:VGNC:69460
Locus tag
EGK_09983
See related
Ensembl:ENSMMUG00000005698
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ACER1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (6243365..6294492, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (6507574..6529716, complement)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase bubblegum family member 2 Neighboring gene uncharacterized LOC106994618 Neighboring gene uncharacterized LOC701983 Neighboring gene MLLT1 super elongation complex subunit Neighboring gene uncharacterized LOC114674142 Neighboring gene caseinolytic mitochondrial matrix peptidase proteolytic subunit Neighboring gene alkB homolog 7 Neighboring gene persephin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkaline ceramidase 1
XP_001087211.1
XP_028695697.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    6243365..6294492 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028839864.1 → XP_028695697.1  alkaline ceramidase 1 isoform X1

    Conserved Domains (1) summary
    pfam05875
    Location:1 → 212
    Ceramidase

  2. XM_001087211.4 → XP_001087211.1  alkaline ceramidase 1 isoform X2

    See identical proteins and their annotated locations for XP_001087211.1

    UniProtKB/TrEMBL
    A0A8J8XX29, F6U4Z7, G7NMK4
    Related
    ENSMMUP00000007520.2, ENSMMUT00000008001.4
    Conserved Domains (1) summary
    pfam05875
    Location:3 → 255
    Ceramidase
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials