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SDK2 sidekick cell adhesion molecule 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 699027, updated on 17-Aug-2024

Summary

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Official Symbol
SDK2provided by VGNC
Official Full Name
sidekick cell adhesion molecule 2provided by VGNC
Primary source
VGNC:VGNC:99225
See related
Ensembl:ENSMMUG00000019970
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SDK2 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
45
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (69651449..69965197, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (66878316..67194931, complement)

Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene mitochondrial nucleoid associated protein 1 Neighboring gene cleavage and polyadenylation specific factor 4 like Neighboring gene CDC42 effector protein 4 Neighboring gene uncharacterized LOC106994126 Neighboring gene uncharacterized LOC106994129 Neighboring gene uncharacterized LOC106994127

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein sidekick-2
Names
sidekick homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041769.1 Reference Mmul_10 Primary Assembly

    Range
    69651449..69965197 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015120232.2 → XP_014975718.2  protein sidekick-2 isoform X1

    UniProtKB/TrEMBL
    A0A5F8AUQ9, G7NJE2
    Related
    ENSMMUP00000080726.1, ENSMMUT00000089280.1
    Conserved Domains (6) summary
    cd00063
    Location:1626 → 1719
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:326 → 394
    Ig; Immunoglobulin domain
    pfam00041
    Location:994 → 1082
    fn3; Fibronectin type III domain
    pfam07679
    Location:402 → 492
    I-set; Immunoglobulin I-set domain
    pfam13927
    Location:26 → 95
    Ig_3; Immunoglobulin domain
    cl11960
    Location:502 → 586
    Ig; Immunoglobulin domain

  2. XM_015120233.2 → XP_014975719.2  protein sidekick-2 isoform X2

    UniProtKB/TrEMBL
    F7FSQ2, G7NJE2
    Related
    ENSMMUP00000026262.4, ENSMMUT00000028070.4
    Conserved Domains (6) summary
    cd00063
    Location:1607 → 1700
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:326 → 394
    Ig; Immunoglobulin domain
    pfam00041
    Location:994 → 1082
    fn3; Fibronectin type III domain
    pfam07679
    Location:402 → 492
    I-set; Immunoglobulin I-set domain
    pfam13927
    Location:26 → 95
    Ig_3; Immunoglobulin domain
    cl11960
    Location:502 → 586
    Ig; Immunoglobulin domain
Nucleotide Protein
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