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ELOC elongin C [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 698922, updated on 17-Aug-2024

Summary

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Official Symbol
ELOCprovided by VGNC
Official Full Name
elongin Cprovided by VGNC
Primary source
VGNC:VGNC:82139
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
TCEB1
Orthologs
human mouse all
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Genomic context

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See ELOC in Genome Data Viewer
Location:
chromosome: 8
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (74446781..74474005, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (72190271..72218427, complement)

Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114680277 Neighboring gene glycogenin-1-like Neighboring gene uncharacterized LOC106999817 Neighboring gene transmembrane protein 70 Neighboring gene lymphocyte antigen 96

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the Macaca mulatta transcriptome and the sequence divergence between Macaca and human. Magness CL, et al. Genome Biol, 2005. PMID 15998449, Free PMC Article
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-macromolecule adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of elongin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongin-C
Names
transcription elongation factor B polypeptide 1
transcription elongation factor B subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001198677.1 → NP_001185606.1  elongin-C

    See identical proteins and their annotated locations for NP_001185606.1

    Status: VALIDATED

    Source sequence(s)
    CN805102
    UniProtKB/TrEMBL
    G7MZK3, I0FUL6
    Conserved Domains (1) summary
    cd18321
    Location:18 → 112
    BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041761.1 Reference Mmul_10 Primary Assembly

    Range
    74446781..74474005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015145513.2 → XP_015000999.1  elongin-C isoform X1

    UniProtKB/TrEMBL
    G7MZK3, I0FUL6
    Conserved Domains (1) summary
    cd18321
    Location:18 → 112
    BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins

  2. XM_015145516.2 → XP_015001002.1  elongin-C isoform X2

    UniProtKB/TrEMBL
    H9F3J1
    Conserved Domains (1) summary
    cd18321
    Location:2 → 96
    BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins

  3. XM_028852144.1 → XP_028707977.1  elongin-C isoform X1

    UniProtKB/TrEMBL
    G7MZK3, I0FUL6
    Conserved Domains (1) summary
    cd18321
    Location:18 → 112
    BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins

  4. XM_015145515.2 → XP_015001001.1  elongin-C isoform X1

    UniProtKB/TrEMBL
    G7MZK3, I0FUL6
    Conserved Domains (1) summary
    cd18321
    Location:18 → 112
    BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins

  5. XM_015145514.2 → XP_015001000.1  elongin-C isoform X1

    UniProtKB/TrEMBL
    G7MZK3, I0FUL6
    Conserved Domains (1) summary
    cd18321
    Location:18 → 112
    BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins
Nucleotide Protein
Heading Accession and Version

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