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LIN7C lin-7 homolog C, crumbs cell polarity complex component [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 698832, updated on 17-Aug-2024

Summary

Official Symbol
LIN7Cprovided by VGNC
Official Full Name
lin-7 homolog C, crumbs cell polarity complex componentprovided by VGNC
Primary source
VGNC:VGNC:74070
Locus tag
EGK_06400
See related
Ensembl:ENSMMUG00000023119
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
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Genomic context

See LIN7C in Genome Data Viewer
Location:
chromosome: 14
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (37943641..37951791)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (38454771..38462902)

Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene brain derived neurotrophic factor Neighboring gene uncharacterized LOC114672299 Neighboring gene leucine rich repeat containing G protein-coupled receptor 4 Neighboring gene coiled-coil domain containing 34

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L27 domain binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in maintenance of epithelial cell apical/basal polarity IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in neurotransmitter secretion IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in protein localization to basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
part_of MPP7-DLG1-LIN7 complex IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
protein lin-7 homolog C
Names
Protein lin-7-like protein C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266451.1NP_001253380.1  protein lin-7 homolog C

    See identical proteins and their annotated locations for NP_001253380.1

    Status: PROVISIONAL

    Source sequence(s)
    JV043503
    UniProtKB/TrEMBL
    A0A8J8XAI2, F7DL15, G7NDP8, H9YYJ1
    Related
    ENSMMUP00000065153.1, ENSMMUT00000079913.1
    Conserved Domains (2) summary
    cd00992
    Location:91172
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam02828
    Location:1466
    L27; L27 domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041767.1 Reference Mmul_10 Primary Assembly

    Range
    37943641..37951791
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)