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DCAF6 DDB1 and CUL4 associated factor 6 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 698686, updated on 17-Aug-2024

Summary

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Official Symbol
DCAF6provided by VGNC
Official Full Name
DDB1 and CUL4 associated factor 6provided by VGNC
Primary source
VGNC:VGNC:99878
See related
Ensembl:ENSMMUG00000010389
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
IQWD1
Orthologs
human mouse all
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Genomic context

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See DCAF6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
24
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (25283351..25424690)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (199613173..199777063, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene adenylate cyclase 10 Neighboring gene mitochondrial pyruvate carrier 2 Neighboring gene microRNA mir-1255b Neighboring gene G protein-coupled receptor 161 Neighboring gene TOR signaling pathway regulator

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear receptor coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DDB1- and CUL4-associated factor 6
Names
IQ motif and WD repeats 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    25283351..25424690
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028850120.1 → XP_028705953.1  DDB1- and CUL4-associated factor 6 isoform X8

    UniProtKB/TrEMBL
    A0A5F7ZA68
    Conserved Domains (3) summary
    pfam05109
    Location:228 → 504
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    sd00039
    Location:48 → 99
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:5 → 145
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_028850122.1 → XP_028705955.1  DDB1- and CUL4-associated factor 6 isoform X9

    UniProtKB/TrEMBL
    A0A5F7ZA68
    Conserved Domains (3) summary
    PRK14949
    Location:142 → 519
    PRK14949; DNA polymerase III subunits gamma and tau; Provisional
    sd00039
    Location:48 → 99
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:5 → 145
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_015125234.2 → XP_014980720.1  DDB1- and CUL4-associated factor 6 isoform X7

    UniProtKB/TrEMBL
    G7MF92
    Conserved Domains (3) summary
    PRK08581
    Location:362 → 581
    PRK08581; amidase domain-containing protein
    sd00039
    Location:48 → 99
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:5 → 145
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_001091235.4 → XP_001091235.1  DDB1- and CUL4-associated factor 6 isoform X1

    See identical proteins and their annotated locations for XP_001091235.1

    UniProtKB/TrEMBL
    F7D9J0, G7MF92
    Related
    ENSMMUP00000013617.4, ENSMMUT00000014535.4
    Conserved Domains (4) summary
    sd00039
    Location:55 → 92
    7WD40; WD40 repeat [structural motif]
    pfam15782
    Location:388 → 518
    GREB1; Gene regulated by oestrogen in breast cancer
    cl25539
    Location:43 → 292
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    cl27702
    Location:509 → 728
    COG3942; Surface antigen [Cell wall/membrane/envelope biogenesis]

  5. XM_015125186.2 → XP_014980672.1  DDB1- and CUL4-associated factor 6 isoform X2

    UniProtKB/TrEMBL
    G7MF92
    Conserved Domains (4) summary
    sd00039
    Location:55 → 92
    7WD40; WD40 repeat [structural motif]
    pfam15782
    Location:388 → 518
    GREB1; Gene regulated by oestrogen in breast cancer
    cl25539
    Location:43 → 292
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    cl27702
    Location:509 → 728
    COG3942; Surface antigen [Cell wall/membrane/envelope biogenesis]

  6. XM_015125203.2 → XP_014980689.1  DDB1- and CUL4-associated factor 6 isoform X3

    UniProtKB/TrEMBL
    F7BF92
    Conserved Domains (3) summary
    sd00039
    Location:55 → 92
    7WD40; WD40 repeat [structural motif]
    cl25496
    Location:375 → 651
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl25539
    Location:43 → 292
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  7. XM_001091473.4 → XP_001091473.1  DDB1- and CUL4-associated factor 6 isoform X4

    See identical proteins and their annotated locations for XP_001091473.1

    UniProtKB/TrEMBL
    F7BF92, H9ES53
    Related
    ENSMMUP00000069173.1, ENSMMUT00000107073.1
    Conserved Domains (3) summary
    sd00039
    Location:55 → 92
    7WD40; WD40 repeat [structural motif]
    cl25496
    Location:375 → 651
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl25539
    Location:43 → 292
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  8. XM_015125219.2 → XP_014980705.1  DDB1- and CUL4-associated factor 6 isoform X5

    UniProtKB/TrEMBL
    F7BF92
    Conserved Domains (3) summary
    sd00039
    Location:55 → 92
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:43 → 292
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    cl26247
    Location:289 → 643
    DNA_pol3_delta2; DNA polymerase III, delta subunit

  9. XM_001091583.3 → XP_001091583.1  DDB1- and CUL4-associated factor 6 isoform X6

    See identical proteins and their annotated locations for XP_001091583.1

    UniProtKB/TrEMBL
    F7BF92, H9ES23
    Related
    ENSMMUP00000065108.1, ENSMMUT00000087061.1
    Conserved Domains (3) summary
    sd00039
    Location:55 → 92
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:43 → 292
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    cl26247
    Location:289 → 643
    DNA_pol3_delta2; DNA polymerase III, delta subunit

  10. XM_028850121.1 → XP_028705954.1  DDB1- and CUL4-associated factor 6 isoform X8

    UniProtKB/TrEMBL
    A0A5F7ZA68
    Conserved Domains (3) summary
    pfam05109
    Location:228 → 504
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    sd00039
    Location:48 → 99
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:5 → 145
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  11. XM_028850123.1 → XP_028705956.1  DDB1- and CUL4-associated factor 6 isoform X9

    UniProtKB/TrEMBL
    A0A5F7ZA68
    Conserved Domains (3) summary
    PRK14949
    Location:142 → 519
    PRK14949; DNA polymerase III subunits gamma and tau; Provisional
    sd00039
    Location:48 → 99
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:5 → 145
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  12. XM_015125249.2 → XP_014980735.1  DDB1- and CUL4-associated factor 6 isoform X7

    UniProtKB/TrEMBL
    G7MF92
    Conserved Domains (3) summary
    PRK08581
    Location:362 → 581
    PRK08581; amidase domain-containing protein
    sd00039
    Location:48 → 99
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:5 → 145
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  13. XM_015125243.2 → XP_014980729.1  DDB1- and CUL4-associated factor 6 isoform X7

    UniProtKB/TrEMBL
    G7MF92
    Conserved Domains (3) summary
    PRK08581
    Location:362 → 581
    PRK08581; amidase domain-containing protein
    sd00039
    Location:48 → 99
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:5 → 145
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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