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LRRFIP2 LRR binding FLII interacting protein 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 698661, updated on 17-Aug-2024

Summary

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Official Symbol
LRRFIP2provided by VGNC
Official Full Name
LRR binding FLII interacting protein 2provided by VGNC
Primary source
VGNC:VGNC:74449
Locus tag
EGK_11804
See related
Ensembl:ENSMMUG00000022539
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See LRRFIP2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
33
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (92471260..92600055, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (105629964..105757513)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene EPM2A interacting protein 1 Neighboring gene uncharacterized LOC114676315 Neighboring gene mutL homolog 1 Neighboring gene U6 spliceosomal RNA Neighboring gene NEDD8-conjugating enzyme UBE2F pseudogene Neighboring gene ubiquitin-conjugating enzyme E2 D3 pseudogene Neighboring gene uncharacterized LOC114676317 Neighboring gene 40S ribosomal protein S16 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC114676139

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat flightless-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    92471260..92600055 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028843947.1 → XP_028699780.1  leucine-rich repeat flightless-interacting protein 2 isoform X24

    UniProtKB/TrEMBL
    A0A5F8ALK6
    Conserved Domains (2) summary
    pfam04111
    Location:339 → 434
    APG6; Autophagy protein Apg6
    pfam09738
    Location:47 → 359
    LRRFIP; LRRFIP family

  2. XM_028843944.1 → XP_028699777.1  leucine-rich repeat flightless-interacting protein 2 isoform X22

    UniProtKB/TrEMBL
    A0A5F8ALK6
    Conserved Domains (2) summary
    pfam04111
    Location:370 → 465
    APG6; Autophagy protein Apg6
    pfam09738
    Location:47 → 390
    LRRFIP; LRRFIP family

  3. XM_028843945.1 → XP_028699778.1  leucine-rich repeat flightless-interacting protein 2 isoform X23

    UniProtKB/TrEMBL
    A0A1D5R5D4, A0A5F8ALK6
    Related
    ENSMMUP00000055521.2, ENSMMUT00000073430.2
    Conserved Domains (2) summary
    pfam04111
    Location:363 → 458
    APG6; Autophagy protein Apg6
    pfam09738
    Location:47 → 383
    LRRFIP; LRRFIP family

  4. XM_028843941.1 → XP_028699774.1  leucine-rich repeat flightless-interacting protein 2 isoform X20

    UniProtKB/TrEMBL
    A0A5F8ALK6
    Conserved Domains (2) summary
    pfam04111
    Location:394 → 489
    APG6; Autophagy protein Apg6
    pfam09738
    Location:47 → 414
    LRRFIP; LRRFIP family

  5. XM_028843939.1 → XP_028699772.1  leucine-rich repeat flightless-interacting protein 2 isoform X19

    UniProtKB/TrEMBL
    A0A5F8ALK6
    Conserved Domains (2) summary
    pfam04111
    Location:397 → 492
    APG6; Autophagy protein Apg6
    pfam09738
    Location:47 → 417
    LRRFIP; LRRFIP family

  6. XM_015131394.2 → XP_014986880.1  leucine-rich repeat flightless-interacting protein 2 isoform X26

    UniProtKB/TrEMBL
    A0A1D5RDZ9, H9EUI0
    Related
    ENSMMUP00000042906.2, ENSMMUT00000056055.2
    Conserved Domains (1) summary
    pfam09738
    Location:47 → 325
    DUF2051; Double stranded RNA binding protein (DUF2051)

  7. XM_015131393.2 → XP_014986879.1  leucine-rich repeat flightless-interacting protein 2 isoform X25

    UniProtKB/TrEMBL
    F6Y9Y9, H9EPE5
    Related
    ENSMMUP00000029676.4, ENSMMUT00000031720.4
    Conserved Domains (1) summary
    pfam09738
    Location:47 → 349
    DUF2051; Double stranded RNA binding protein (DUF2051)

  8. XM_015131376.2 → XP_014986862.1  leucine-rich repeat flightless-interacting protein 2 isoform X1

    Conserved Domains (3) summary
    pfam04156
    Location:422 → 545
    IncA; IncA protein
    pfam04111
    Location:649 → 744
    APG6; Autophagy protein Apg6
    pfam09738
    Location:315 → 669
    LRRFIP; LRRFIP family

  9. XM_028843946.1 → XP_028699779.1  leucine-rich repeat flightless-interacting protein 2 isoform X23

    UniProtKB/TrEMBL
    A0A1D5R5D4, A0A5F8ALK6
    Conserved Domains (2) summary
    pfam04111
    Location:363 → 458
    APG6; Autophagy protein Apg6
    pfam09738
    Location:47 → 383
    LRRFIP; LRRFIP family

  10. XM_028843942.1 → XP_028699775.1  leucine-rich repeat flightless-interacting protein 2 isoform X20

    UniProtKB/TrEMBL
    A0A5F8ALK6
    Conserved Domains (2) summary
    pfam04111
    Location:394 → 489
    APG6; Autophagy protein Apg6
    pfam09738
    Location:47 → 414
    LRRFIP; LRRFIP family

  11. XM_028843930.1 → XP_028699763.1  leucine-rich repeat flightless-interacting protein 2 isoform X1

    Conserved Domains (3) summary
    pfam04156
    Location:422 → 545
    IncA; IncA protein
    pfam04111
    Location:649 → 744
    APG6; Autophagy protein Apg6
    pfam09738
    Location:315 → 669
    LRRFIP; LRRFIP family

  12. XM_028843932.1 → XP_028699765.1  leucine-rich repeat flightless-interacting protein 2 isoform X1

    Conserved Domains (3) summary
    pfam04156
    Location:422 → 545
    IncA; IncA protein
    pfam04111
    Location:649 → 744
    APG6; Autophagy protein Apg6
    pfam09738
    Location:315 → 669
    LRRFIP; LRRFIP family

  13. XM_015131388.2 → XP_014986874.1  leucine-rich repeat flightless-interacting protein 2 isoform X12

    Conserved Domains (2) summary
    pfam09738
    Location:279 → 633
    DUF2051; Double stranded RNA binding protein (DUF2051)
    pfam13870
    Location:409 → 506
    DUF4201; Domain of unknown function (DUF4201)

  14. XM_028843943.1 → XP_028699776.1  leucine-rich repeat flightless-interacting protein 2 isoform X21

    UniProtKB/TrEMBL
    A0A5F8ALK6
    Conserved Domains (2) summary
    pfam04111
    Location:373 → 468
    APG6; Autophagy protein Apg6
    pfam09738
    Location:47 → 393
    LRRFIP; LRRFIP family

  15. XM_015131391.2 → XP_014986877.1  leucine-rich repeat flightless-interacting protein 2 isoform X18

    UniProtKB/TrEMBL
    A0A5F8ALK6
    Conserved Domains (1) summary
    pfam09738
    Location:47 → 424
    DUF2051; Double stranded RNA binding protein (DUF2051)

  16. XM_028843948.1 → XP_028699781.1  leucine-rich repeat flightless-interacting protein 2 isoform X27

    Conserved Domains (2) summary
    pfam04111
    Location:562 → 657
    APG6; Autophagy protein Apg6
    pfam09738
    Location:283 → 582
    LRRFIP; LRRFIP family

  17. XM_028843949.1 → XP_028699782.1  leucine-rich repeat flightless-interacting protein 2 isoform X28

    Conserved Domains (2) summary
    pfam04111
    Location:571 → 666
    APG6; Autophagy protein Apg6
    pfam09738
    Location:261 → 591
    LRRFIP; LRRFIP family

  18. XM_028843933.1 → XP_028699766.1  leucine-rich repeat flightless-interacting protein 2 isoform X5

    Conserved Domains (3) summary
    pfam04156
    Location:405 → 528
    IncA; IncA protein
    pfam04111
    Location:632 → 727
    APG6; Autophagy protein Apg6
    pfam09738
    Location:298 → 652
    LRRFIP; LRRFIP family

  19. XM_015131387.2 → XP_014986873.1  leucine-rich repeat flightless-interacting protein 2 isoform X11

    Conserved Domains (2) summary
    pfam09738
    Location:281 → 635
    DUF2051; Double stranded RNA binding protein (DUF2051)
    pfam13870
    Location:411 → 508
    DUF4201; Domain of unknown function (DUF4201)

  20. XM_028843934.1 → XP_028699767.1  leucine-rich repeat flightless-interacting protein 2 isoform X6

    Conserved Domains (3) summary
    pfam04156
    Location:403 → 526
    IncA; IncA protein
    pfam04111
    Location:630 → 725
    APG6; Autophagy protein Apg6
    pfam09738
    Location:296 → 650
    LRRFIP; LRRFIP family

  21. XM_015131383.2 → XP_014986869.1  leucine-rich repeat flightless-interacting protein 2 isoform X7

    UniProtKB/TrEMBL
    A0A663D9A4, A0A8J8XWJ0, F6YA06, G7MJ23
    Related
    ENSMMUP00000029674.4, ENSMMUT00000031718.4
    Conserved Domains (2) summary
    pfam09738
    Location:292 → 646
    DUF2051; Double stranded RNA binding protein (DUF2051)
    pfam13870
    Location:422 → 519
    DUF4201; Domain of unknown function (DUF4201)

  22. XM_015131390.2 → XP_014986876.1  leucine-rich repeat flightless-interacting protein 2 isoform X17

    Conserved Domains (1) summary
    pfam09738
    Location:195 → 549
    DUF2051; Double stranded RNA binding protein (DUF2051)

  23. XM_015131382.2 → XP_014986868.1  leucine-rich repeat flightless-interacting protein 2 isoform X4

    Conserved Domains (2) summary
    pfam04156
    Location:414 → 529
    IncA; IncA protein
    pfam09738
    Location:299 → 653
    DUF2051; Double stranded RNA binding protein (DUF2051)

  24. XM_015131379.2 → XP_014986865.1  leucine-rich repeat flightless-interacting protein 2 isoform X2

    UniProtKB/TrEMBL
    F6YA06
    Conserved Domains (2) summary
    pfam09738
    Location:314 → 668
    DUF2051; Double stranded RNA binding protein (DUF2051)
    pfam13870
    Location:444 → 541
    DUF4201; Domain of unknown function (DUF4201)

  25. XM_028843938.1 → XP_028699771.1  leucine-rich repeat flightless-interacting protein 2 isoform X16

    Conserved Domains (2) summary
    pfam04111
    Location:579 → 674
    APG6; Autophagy protein Apg6
    pfam09738
    Location:300 → 599
    LRRFIP; LRRFIP family

  26. XM_015131380.2 → XP_014986866.1  leucine-rich repeat flightless-interacting protein 2 isoform X3

    Conserved Domains (2) summary
    pfam04156
    Location:415 → 530
    IncA; IncA protein
    pfam09738
    Location:300 → 654
    DUF2051; Double stranded RNA binding protein (DUF2051)

  27. XM_028843937.1 → XP_028699770.1  leucine-rich repeat flightless-interacting protein 2 isoform X14

    Conserved Domains (2) summary
    pfam04111
    Location:588 → 683
    APG6; Autophagy protein Apg6
    pfam09738
    Location:278 → 608
    LRRFIP; LRRFIP family

  28. XM_015131385.2 → XP_014986871.1  leucine-rich repeat flightless-interacting protein 2 isoform X9

    Conserved Domains (1) summary
    pfam09738
    Location:278 → 639
    DUF2051; Double stranded RNA binding protein (DUF2051)

  29. XM_028843936.1 → XP_028699769.1  leucine-rich repeat flightless-interacting protein 2 isoform X13

    Conserved Domains (2) summary
    pfam04111
    Location:594 → 689
    APG6; Autophagy protein Apg6
    pfam09738
    Location:315 → 614
    LRRFIP; LRRFIP family

  30. XM_015131384.2 → XP_014986870.1  leucine-rich repeat flightless-interacting protein 2 isoform X8

    Conserved Domains (2) summary
    pfam09738
    Location:315 → 645
    DUF2051; Double stranded RNA binding protein (DUF2051)
    pfam13870
    Location:421 → 518
    DUF4201; Domain of unknown function (DUF4201)

  31. XM_015131389.2 → XP_014986875.1  leucine-rich repeat flightless-interacting protein 2 isoform X15

    Conserved Domains (3) summary
    pfam09738
    Location:315 → 604
    DUF2051; Double stranded RNA binding protein (DUF2051)
    pfam16043
    Location:501 → 656
    DUF4795; Domain of unknown function (DUF4795)
    pfam17031
    Location:371 → 427
    DUF5101; Domain of unknown function (DUF5101)

  32. XM_015131386.2 → XP_014986872.1  leucine-rich repeat flightless-interacting protein 2 isoform X10

    Conserved Domains (3) summary
    pfam09738
    Location:315 → 638
    DUF2051; Double stranded RNA binding protein (DUF2051)
    cd16269
    Location:485 → 498
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:365 → 505
    GBP_C; Guanylate-binding protein, C-terminal domain

  33. XM_015131375.2 → XP_014986861.1  leucine-rich repeat flightless-interacting protein 2 isoform X1

    Conserved Domains (3) summary
    pfam04156
    Location:422 → 545
    IncA; IncA protein
    pfam04111
    Location:649 → 744
    APG6; Autophagy protein Apg6
    pfam09738
    Location:315 → 669
    LRRFIP; LRRFIP family

  34. XM_015131377.2 → XP_014986863.1  leucine-rich repeat flightless-interacting protein 2 isoform X1

    Conserved Domains (3) summary
    pfam04156
    Location:422 → 545
    IncA; IncA protein
    pfam04111
    Location:649 → 744
    APG6; Autophagy protein Apg6
    pfam09738
    Location:315 → 669
    LRRFIP; LRRFIP family
Nucleotide Protein
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