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ISG20 interferon stimulated exonuclease gene 20 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 698376, updated on 17-Aug-2024

Summary

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Official Symbol
ISG20provided by VGNC
Official Full Name
interferon stimulated exonuclease gene 20provided by VGNC
Primary source
VGNC:VGNC:73769
Locus tag
EGK_17807
See related
Ensembl:ENSMMUG00000007669
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ISG20 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (67388764..67405372)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (66619503..66645277)

Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-1179 Neighboring gene microRNA mir-7-2 Neighboring gene apoptosis enhancing nuclease Neighboring gene aggrecan Neighboring gene hyaluronan and proteoglycan link protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in RNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to virus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of viral genome replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interferon-stimulated gene 20 kDa protein
NP_001244982.1
XP_014998429.1
XP_028706074.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001258053.1 → NP_001244982.1  interferon-stimulated gene 20 kDa protein

    See identical proteins and their annotated locations for NP_001244982.1

    Status: PROVISIONAL

    Source sequence(s)
    JU473329
    UniProtKB/TrEMBL
    A0A8J8Y1M6, F7D5S9, G7MYR7
    Related
    ENSMMUP00000074907.1, ENSMMUT00000080625.1
    Conserved Domains (2) summary
    COG0847
    Location:39 → 162
    DnaQ; DNA polymerase III, epsilon subunit or related 3'-5' exonuclease [Replication, recombination and repair]
    cl10012
    Location:8 → 163
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041760.1 Reference Mmul_10 Primary Assembly

    Range
    67388764..67405372
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028850241.1 → XP_028706074.1  interferon-stimulated gene 20 kDa protein isoform X2

    Conserved Domains (1) summary
    cl10012
    Location:8 → 143
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily

  2. XM_015142943.2 → XP_014998429.1  interferon-stimulated gene 20 kDa protein isoform X1

    Conserved Domains (1) summary
    cl10012
    Location:8 → 143
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily
Nucleotide Protein
Heading Accession and Version

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