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AMACR alpha-methylacyl-CoA racemase [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 698365, updated on 5-Mar-2024

Summary

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Gene symbol
AMACR
Gene description
alpha-methylacyl-CoA racemase
See related
Ensembl:ENSMMUG00000013467
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See AMACR in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (34118902..34142278, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (34677646..34697027, complement)

Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene 26S proteasome regulatory subunit 10B-like Neighboring gene uncharacterized LOC114678766 Neighboring gene solute carrier family 45 member 2 Neighboring gene fumarate hydratase, mitochondrial pseudogene Neighboring gene C1q and TNF related 3 Neighboring gene retinoic acid induced 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-methylacyl-CoA racemase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-methylacyl-CoA racemase
Names
alpha-methylacyl-CoA racemase pseudogene
NP_001253926.1
XP_014995288.1
XP_028704961.1
XP_028704962.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266997.1 → NP_001253926.1  alpha-methylacyl-CoA racemase

    See identical proteins and their annotated locations for NP_001253926.1

    Status: PROVISIONAL

    Source sequence(s)
    JU323472
    UniProtKB/TrEMBL
    F7H4C8, G7MV25
    Related
    ENSMMUP00000034885.1, ENSMMUT00000041874.3
    Conserved Domains (1) summary
    COG1804
    Location:3 → 373
    CaiB; Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases [Lipid transport and metabolism]

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041759.1 Reference Mmul_10 Primary Assembly

    Range
    34118902..34142278 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028849128.1 → XP_028704961.1  alpha-methylacyl-CoA racemase isoform X1

    UniProtKB/TrEMBL
    G7MV25
    Conserved Domains (1) summary
    COG1804
    Location:3 → 373
    CaiB; Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases [Lipid transport and metabolism]

  2. XM_015139802.2 → XP_014995288.1  alpha-methylacyl-CoA racemase isoform X3

    UniProtKB/TrEMBL
    F7H4D0, H9EXU1
    Related
    ENSMMUP00000034884.3, ENSMMUT00000041873.3
    Conserved Domains (1) summary
    cl19215
    Location:3 → 131
    CoA_transf_3; CoA-transferase family III

  3. XM_028849129.1 → XP_028704962.1  alpha-methylacyl-CoA racemase isoform X2

    UniProtKB/TrEMBL
    G7MV25
    Conserved Domains (1) summary
    COG1804
    Location:21 → 313
    CaiB; Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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