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CPEB3 cytoplasmic polyadenylation element binding protein 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 698133, updated on 18-Sep-2024

Summary

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Official Symbol
CPEB3provided by VGNC
Official Full Name
cytoplasmic polyadenylation element binding protein 3provided by VGNC
Primary source
VGNC:VGNC:71449
See related
Ensembl:ENSMMUG00000015050
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CPEB3 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (92213276..92459836, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (87271634..87517871, complement)

Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor binding protein 3 Neighboring gene B-TFIID TATA-box binding protein associated factor 1 Neighboring gene succinate dehydrogenase cytochrome b560 subunit, mitochondrial pseudogene Neighboring gene eukaryotic initiation factor 4A-I-like Neighboring gene membrane associated ring-CH-type finger 5 Neighboring gene uncharacterized LOC107000223 Neighboring gene insulin degrading enzyme

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA regulatory element binding translation repressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation factor activity, RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoplasmic polyadenylation element-binding protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041762.1 Reference Mmul_10 Primary Assembly

    Range
    92213276..92459836 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028826658.1 → XP_028682491.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A1D5RAX4
    Conserved Domains (3) summary
    cd12724
    Location:461 → 552
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:569 → 649
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:644 → 705
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  2. XM_015147694.2 → XP_015003180.2  cytoplasmic polyadenylation element-binding protein 3 isoform X5

    UniProtKB/TrEMBL
    F6TL27
    Related
    ENSMMUP00000019726.4, ENSMMUT00000021096.4
    Conserved Domains (3) summary
    cd12724
    Location:411 → 502
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:519 → 599
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:594 → 655
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  3. XM_002805760.3 → XP_002805806.3  cytoplasmic polyadenylation element-binding protein 3 isoform X4

    UniProtKB/TrEMBL
    F6TL27
    Related
    ENSMMUP00000080853.1, ENSMMUT00000090427.1
    Conserved Domains (3) summary
    cd12724
    Location:430 → 521
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:538 → 618
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:613 → 674
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  4. XM_015147693.2 → XP_015003179.2  cytoplasmic polyadenylation element-binding protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A1D5RAX4
    Conserved Domains (3) summary
    cd12724
    Location:438 → 529
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:546 → 626
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:621 → 682
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  5. XM_015147688.2 → XP_015003174.2  cytoplasmic polyadenylation element-binding protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A1D5R3E7
    Related
    ENSMMUP00000054833.2, ENSMMUT00000056470.2
    Conserved Domains (3) summary
    cd12724
    Location:453 → 544
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:561 → 641
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:636 → 697
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  6. XM_015147687.2 → XP_015003173.2  cytoplasmic polyadenylation element-binding protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A1D5RAX4
    Conserved Domains (3) summary
    cd12724
    Location:461 → 552
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:569 → 649
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:644 → 705
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  7. XM_015147689.2 → XP_015003175.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A1D5RAX4
    Conserved Domains (3) summary
    cd12724
    Location:461 → 552
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:569 → 649
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:644 → 705
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  8. XM_015147692.2 → XP_015003178.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A1D5RAX4
    Conserved Domains (3) summary
    cd12724
    Location:461 → 552
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:569 → 649
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:644 → 705
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  9. XM_015147691.2 → XP_015003177.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A1D5RAX4
    Related
    ENSMMUP00000057465.2, ENSMMUT00000058829.2
    Conserved Domains (3) summary
    cd12724
    Location:461 → 552
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:569 → 649
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:644 → 705
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
Nucleotide Protein
Heading Accession and Version

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