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PDZD9 PDZ domain containing 9 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 698098, updated on 17-Aug-2024

Summary

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Official Symbol
PDZD9provided by VGNC
Official Full Name
PDZ domain containing 9provided by VGNC
Primary source
VGNC:VGNC:75879
Locus tag
EGK_12583
See related
Ensembl:ENSMMUG00000018288
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
C20H16orf65
Orthologs
human mouse all
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Genomic context

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See PDZD9 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (20241872..20259334, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (20575061..20592518, complement)

Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily A member 15 Neighboring gene ubiquinol-cytochrome c reductase core protein II Neighboring gene uncharacterized LOC106994971 Neighboring gene modulator of smoothened Neighboring gene von Willebrand factor A domain containing 3A Neighboring gene short chain dehydrogenase/reductase family 42E, member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PDZ domain-containing protein 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041773.1 Reference Mmul_10 Primary Assembly

    Range
    20241872..20259334 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015125773.2 → XP_014981259.1  PDZ domain-containing protein 9 isoform X2

    UniProtKB/TrEMBL
    F7HJV0
    Related
    ENSMMUP00000024043.4, ENSMMUT00000025699.4

  2. XM_001092453.4 → XP_001092453.1  PDZ domain-containing protein 9 isoform X1

    See identical proteins and their annotated locations for XP_001092453.1

    UniProtKB/TrEMBL
    G7NPZ9
    Conserved Domains (1) summary
    cd00992
    Location:39 → 106
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials