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UBXN2B UBX domain protein 2B [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 698001, updated on 17-Aug-2024

Summary

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Official Symbol
UBXN2Bprovided by VGNC
Official Full Name
UBX domain protein 2Bprovided by VGNC
Primary source
VGNC:VGNC:79652
See related
Ensembl:ENSMMUG00000001100
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See UBXN2B in Genome Data Viewer
Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (59066767..59106808)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (56424468..56460825)

Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 110 member B Neighboring gene U6 spliceosomal RNA Neighboring gene tyrosine-protein phosphatase non-receptor type 11 pseudogene Neighboring gene cytochrome P450 family 7 subfamily A member 1 Neighboring gene prothymosin alpha-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear membrane reassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UBX domain-containing protein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001261602.1 → NP_001248531.1  UBX domain-containing protein 2B

    See identical proteins and their annotated locations for NP_001248531.1

    Status: PROVISIONAL

    Source sequence(s)
    JV046225
    UniProtKB/TrEMBL
    F6PW57, F6TBQ2, G7MZE7, H9FQ31
    Related
    ENSMMUP00000001465.4, ENSMMUT00000001558.4
    Conserved Domains (2) summary
    cd01770
    Location:253 → 331
    p47_UBX; p47-like ubiquitin domain
    smart00553
    Location:140 → 232
    SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041761.1 Reference Mmul_10 Primary Assembly

    Range
    59066767..59106808
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028852130.1 → XP_028707963.1  UBX domain-containing protein 2B isoform X1

    UniProtKB/TrEMBL
    A0A1D5QL65
    Related
    ENSMMUP00000048790.1, ENSMMUT00000058607.2
    Conserved Domains (1) summary
    pfam08059
    Location:146 → 178
    SEP; SEP domain

  2. XM_028852131.1 → XP_028707964.1  UBX domain-containing protein 2B isoform X1

    UniProtKB/TrEMBL
    A0A1D5QL65
    Conserved Domains (1) summary
    pfam08059
    Location:146 → 178
    SEP; SEP domain

RNA

  1. XR_003732159.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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