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POLR3E RNA polymerase III subunit E [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 697901, updated on 17-Aug-2024

Summary

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Official Symbol
POLR3Eprovided by VGNC
Official Full Name
RNA polymerase III subunit Eprovided by VGNC
Primary source
VGNC:VGNC:76142
Locus tag
EGK_12589
See related
Ensembl:ENSMMUG00000002257
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See POLR3E in Genome Data Viewer
Location:
chromosome: 20
Exon count:
23
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (20561934..20599983)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (20898988..20936486)

Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene eukaryotic elongation factor 2 kinase Neighboring gene transfer RNA leucine (anticodon AAG) Neighboring gene cerebellar degeneration related protein 2 Neighboring gene uncharacterized LOC114674329

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase III subunit RPC5
Names
polymerase (RNA) III (DNA directed) polypeptide E (80kD)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041773.1 Reference Mmul_10 Primary Assembly

    Range
    20561934..20599983
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015125782.2 → XP_014981268.2  DNA-directed RNA polymerase III subunit RPC5 isoform X3

    UniProtKB/TrEMBL
    A0A5K1UQW7, F7BAT3
    Related
    ENSMMUP00000003012.4, ENSMMUT00000003192.4
    Conserved Domains (1) summary
    pfam04801
    Location:5 → 432
    Sin_N; Sin-like protein conserved region

  2. XM_028841038.1 → XP_028696871.1  DNA-directed RNA polymerase III subunit RPC5 isoform X6

    UniProtKB/TrEMBL
    A0A1D5QKV3
    Conserved Domains (1) summary
    pfam04801
    Location:7 → 317
    Sin_N; Sin-like protein conserved region

  3. XM_015125784.2 → XP_014981270.2  DNA-directed RNA polymerase III subunit RPC5 isoform X4

    UniProtKB/TrEMBL
    A0A5K1UQW7
    Related
    ENSMMUP00000042916.2, ENSMMUT00000076831.2
    Conserved Domains (1) summary
    pfam04801
    Location:5 → 431
    Sin_N; Sin-like protein conserved region

  4. XM_015125777.2 → XP_014981263.2  DNA-directed RNA polymerase III subunit RPC5 isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZXJ2, A0A5K1UQW7
    Related
    ENSMMUP00000032555.3, ENSMMUT00000039468.3
    Conserved Domains (1) summary
    pfam04801
    Location:35 → 462
    Sin_N; Sin-like protein conserved region

  5. XM_015125779.2 → XP_014981265.2  DNA-directed RNA polymerase III subunit RPC5 isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZXJ2, A0A5K1UQW7
    Related
    ENSMMUP00000069365.1, ENSMMUT00000084788.1
    Conserved Domains (1) summary
    pfam04801
    Location:35 → 462
    Sin_N; Sin-like protein conserved region

  6. XM_015125781.2 → XP_014981267.2  DNA-directed RNA polymerase III subunit RPC5 isoform X3

    UniProtKB/TrEMBL
    A0A5K1UQW7, F7BAT3
    Conserved Domains (1) summary
    pfam04801
    Location:5 → 432
    Sin_N; Sin-like protein conserved region

  7. XM_015125783.2 → XP_014981269.2  DNA-directed RNA polymerase III subunit RPC5 isoform X3

    UniProtKB/TrEMBL
    A0A5K1UQW7, F7BAT3
    Conserved Domains (1) summary
    pfam04801
    Location:5 → 432
    Sin_N; Sin-like protein conserved region

  8. XM_015125780.2 → XP_014981266.2  DNA-directed RNA polymerase III subunit RPC5 isoform X2

    UniProtKB/TrEMBL
    A0A5K1UQW7
    Conserved Domains (1) summary
    pfam04801
    Location:35 → 461
    Sin_N; Sin-like protein conserved region

  9. XM_028841037.1 → XP_028696870.1  DNA-directed RNA polymerase III subunit RPC5 isoform X6

    UniProtKB/TrEMBL
    A0A1D5QKV3
    Conserved Domains (1) summary
    pfam04801
    Location:7 → 317
    Sin_N; Sin-like protein conserved region

  10. XM_028841036.1 → XP_028696869.1  DNA-directed RNA polymerase III subunit RPC5 isoform X5

    UniProtKB/TrEMBL
    A0A1D5QKV3
    Conserved Domains (1) summary
    pfam04801
    Location:1 → 336
    Sin_N; Sin-like protein conserved region

  11. XM_028841035.1 → XP_028696868.1  DNA-directed RNA polymerase III subunit RPC5 isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZXJ2, A0A5K1UQW7
    Conserved Domains (1) summary
    pfam04801
    Location:35 → 462
    Sin_N; Sin-like protein conserved region

  12. XM_015125778.2 → XP_014981264.2  DNA-directed RNA polymerase III subunit RPC5 isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZXJ2, A0A5K1UQW7
    Conserved Domains (1) summary
    pfam04801
    Location:35 → 462
    Sin_N; Sin-like protein conserved region
Nucleotide Protein
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