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KLF3 KLF transcription factor 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 697724, updated on 17-Aug-2024

Summary

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Official Symbol
KLF3provided by VGNC
Official Full Name
KLF transcription factor 3provided by VGNC
Primary source
VGNC:VGNC:73840
Locus tag
EGK_15646
See related
Ensembl:ENSMMUG00000003363
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See KLF3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (37797507..37831974)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (38304315..38338846)

Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678152 Neighboring gene putative uncharacterized protein FLJ13197 Neighboring gene uncharacterized LOC114678278 Neighboring gene uncharacterized LOC106998310 Neighboring gene uncharacterized LOC114678153

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Krueppel-like factor 3
Names
Basic krueppel-like factor
Kruppel like factor 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001261280.1 → NP_001248209.1  Krueppel-like factor 3

    See identical proteins and their annotated locations for NP_001248209.1

    Status: PROVISIONAL

    Source sequence(s)
    JV047272
    UniProtKB/TrEMBL
    A0A8J8XGI0, F7E8X0, G7MSQ9
    Related
    ENSMMUP00000004480.2, ENSMMUT00000004753.4
    Conserved Domains (4) summary
    sd00017
    Location:262 → 284
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:260 → 284
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:306 → 331
    zf-H2C2_2; Zinc-finger double domain
    cd21577
    Location:49 → 260
    KLF3_N; N-terminal domain of Kruppel-like factor 3

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041758.1 Reference Mmul_10 Primary Assembly

    Range
    37797507..37831974
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015138149.2 → XP_014993635.1  Krueppel-like factor 3 isoform X1

    UniProtKB/TrEMBL
    A0A8J8XGI0, F7E8X0, G7MSQ9
    Related
    ENSMMUP00000073578.1, ENSMMUT00000106210.1
    Conserved Domains (4) summary
    sd00017
    Location:262 → 284
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:260 → 284
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:306 → 331
    zf-H2C2_2; Zinc-finger double domain
    cd21577
    Location:49 → 260
    KLF3_N; N-terminal domain of Kruppel-like factor 3

  2. XM_015138150.2 → XP_014993636.1  Krueppel-like factor 3 isoform X1

    UniProtKB/TrEMBL
    A0A8J8XGI0, F7E8X0, G7MSQ9
    Conserved Domains (4) summary
    sd00017
    Location:262 → 284
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:260 → 284
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:306 → 331
    zf-H2C2_2; Zinc-finger double domain
    cd21577
    Location:49 → 260
    KLF3_N; N-terminal domain of Kruppel-like factor 3

  3. XM_015138151.2 → XP_014993637.1  Krueppel-like factor 3 isoform X2

    Conserved Domains (4) summary
    COG5189
    Location:233 → 315
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:237 → 259
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:281 → 306
    zf-H2C2_2; Zinc-finger double domain
    cd21577
    Location:24 → 235
    KLF3_N; N-terminal domain of Kruppel-like factor 3
Nucleotide Protein
Heading Accession and Version

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