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TMCO6 transmembrane and coiled-coil domains 6 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 697611, updated on 17-Aug-2024

Summary

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Official Symbol
TMCO6provided by VGNC
Official Full Name
transmembrane and coiled-coil domains 6provided by VGNC
Primary source
VGNC:VGNC:84507
See related
Ensembl:ENSMMUG00000018246
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See TMCO6 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (138020152..138026513)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (138404769..138411150)

Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100429177 Neighboring gene HAUS augmin-like complex subunit 1 pseudogene Neighboring gene uncharacterized LOC114678916 Neighboring gene CD14 molecule Neighboring gene NADH:ubiquinone oxidoreductase subunit A2 Neighboring gene IK cytokine Neighboring gene WD repeat domain 55

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear import signal receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and coiled-coil domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041759.1 Reference Mmul_10 Primary Assembly

    Range
    138020152..138026513
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015141032.2 → XP_014996518.1  transmembrane and coiled-coil domain-containing protein 6 isoform X1

    UniProtKB/TrEMBL
    H9EVU7
    Conserved Domains (3) summary
    COG5064
    Location:23 → 394
    SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
    cd00020
    Location:107 → 218
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00043
    Location:104 → 135
    ARM; armadillo repeat [structural motif]

  2. XM_015141034.2 → XP_014996520.1  transmembrane and coiled-coil domain-containing protein 6 isoform X3

    UniProtKB/TrEMBL
    H9EVU7
    Conserved Domains (3) summary
    COG5064
    Location:23 → 394
    SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
    cd00020
    Location:107 → 218
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00043
    Location:104 → 135
    ARM; armadillo repeat [structural motif]

  3. XM_015141036.2 → XP_014996522.1  transmembrane and coiled-coil domain-containing protein 6 isoform X4

    Conserved Domains (1) summary
    cd00020
    Location:233 → 314
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...

  4. XM_015141033.2 → XP_014996519.1  transmembrane and coiled-coil domain-containing protein 6 isoform X2

    UniProtKB/TrEMBL
    F7E024, H9EVU7
    Related
    ENSMMUP00000023984.4, ENSMMUT00000025637.4
    Conserved Domains (3) summary
    COG5064
    Location:23 → 393
    SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
    cd00020
    Location:107 → 218
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00043
    Location:104 → 135
    ARM; armadillo repeat [structural motif]

  5. XM_015141037.2 → XP_014996523.1  transmembrane and coiled-coil domain-containing protein 6 isoform X6

    Conserved Domains (3) summary
    cd00020
    Location:4 → 109
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00043
    Location:34 → 69
    ARM; armadillo repeat [structural motif]
    cl22454
    Location:224 → 305
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...

  6. XM_028849755.1 → XP_028705588.1  transmembrane and coiled-coil domain-containing protein 6 isoform X7

    Conserved Domains (2) summary
    COG5064
    Location:4 → 284
    SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
    sd00043
    Location:34 → 69
    ARM; armadillo repeat [structural motif]

  7. XM_028849754.1 → XP_028705587.1  transmembrane and coiled-coil domain-containing protein 6 isoform X5

    Conserved Domains (1) summary
    COG5064
    Location:64 → 293
    SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
Nucleotide Protein
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