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RCAN1 regulator of calcineurin 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 697108, updated on 17-Aug-2024

Summary

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Official Symbol
RCAN1provided by VGNC
Official Full Name
regulator of calcineurin 1provided by VGNC
Primary source
VGNC:VGNC:76874
See related
Ensembl:ENSMMUG00000004600
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See RCAN1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (11954956..12053394)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (12087426..12185833)

Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114676815 Neighboring gene chloride intracellular channel 6 Neighboring gene uncharacterized LOC114676816 Neighboring gene uncharacterized LOC114676817 Neighboring gene small nucleolar RNA SNORA11 Neighboring gene potassium voltage-gated channel subfamily E regulatory subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-dependent protein serine/threonine phosphatase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcipressin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041756.1 Reference Mmul_10 Primary Assembly

    Range
    11954956..12053394
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015132920.2 → XP_014988406.1  calcipressin-1 isoform X1

    Conserved Domains (1) summary
    cl17169
    Location:74 → 196
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_001088613.4 → XP_001088613.1  calcipressin-1 isoform X2

    See identical proteins and their annotated locations for XP_001088613.1

    UniProtKB/TrEMBL
    H9F723
    Conserved Domains (1) summary
    pfam04847
    Location:74 → 242
    Calcipressin

  3. XM_015132922.2 → XP_014988408.1  calcipressin-1 isoform X4

    UniProtKB/TrEMBL
    F6Q8Z0, F6Q911, G7MMU1
    Related
    ENSMMUP00000006115.2, ENSMMUT00000006502.3
    Conserved Domains (1) summary
    pfam04847
    Location:23 → 190
    Calcipressin

  4. XM_015132921.2 → XP_014988407.1  calcipressin-1 isoform X3

    Conserved Domains (1) summary
    cd12708
    Location:11 → 103
    RRM_RCAN1; RNA recognition motif in vertebrate regulator of calcineurin 1 (RCAN1)

  5. XM_028845331.1 → XP_028701164.1  calcipressin-1 isoform X5

    Conserved Domains (1) summary
    cl17169
    Location:1 → 110
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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