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SLAIN1 SLAIN motif family member 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 697095, updated on 17-Aug-2024

Summary

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Official Symbol
SLAIN1provided by VGNC
Official Full Name
SLAIN motif family member 1provided by VGNC
Primary source
VGNC:VGNC:106296
See related
Ensembl:ENSMMUG00000000049
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SLAIN1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 17 NC_041770.1 (59507312..59573582)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (59016991..59082197)

Chromosome 17 - NC_041770.1Genomic Context describing neighboring genes Neighboring gene sciellin Neighboring gene 60S ribosomal protein L31 pseudogene Neighboring gene uncharacterized LOC114673590 Neighboring gene uncharacterized LOC106994330 Neighboring gene endothelin receptor type B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cytoplasmic microtubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of microtubule polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in microtubule plus-end IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SLAIN motif-containing protein 1
Names
SLAIN motif-containing protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041770.1 Reference Mmul_10 Primary Assembly

    Range
    59507312..59573582
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028837620.1 → XP_028693453.1  SLAIN motif-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    F7HP91
    Related
    ENSMMUP00000000065.4, ENSMMUT00000000071.4
    Conserved Domains (1) summary
    pfam15301
    Location:212 → 643
    SLAIN; SLAIN motif-containing family

  2. XM_028837621.1 → XP_028693454.1  SLAIN motif-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    F7HP96
    Related
    ENSMMUP00000000063.3, ENSMMUT00000000069.3
    Conserved Domains (1) summary
    pfam15301
    Location:212 → 593
    SLAIN; SLAIN motif-containing family

  3. XM_028837622.1 → XP_028693455.1  SLAIN motif-containing protein 1 isoform X3

    Conserved Domains (1) summary
    pfam15301
    Location:46 → 476
    SLAIN; SLAIN motif-containing family

  4. XM_001088489.4 → XP_001088489.3  SLAIN motif-containing protein 1 isoform X4

    UniProtKB/TrEMBL
    G7NJG5
    Conserved Domains (1) summary
    pfam15301
    Location:46 → 426
    SLAIN; SLAIN motif-containing family

  5. XM_015121268.2 → XP_014976754.1  SLAIN motif-containing protein 1 isoform X5

    UniProtKB/TrEMBL
    F7HP87
    Related
    ENSMMUP00000000066.4, ENSMMUT00000000072.4
    Conserved Domains (1) summary
    pfam15301
    Location:1 → 305
    SLAIN; SLAIN motif-containing family
Nucleotide Protein
Heading Accession and Version

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