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RBL2 RB transcriptional corepressor like 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 696992, updated on 17-Aug-2024

Summary

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Official Symbol
RBL2provided by VGNC
Official Full Name
RB transcriptional corepressor like 2provided by VGNC
Primary source
VGNC:VGNC:99582
See related
Ensembl:ENSMMUG00000043440
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See RBL2 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
26
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (40495165..40623360)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (37400227..37528626)

Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene U3 small nucleolar ribonucleoprotein protein MPP10 Neighboring gene golgin A6 family like 2 Neighboring gene 60S ribosomal protein L6 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene AKT interacting protein Neighboring gene RPGRIP1 like Neighboring gene FTO alpha-ketoglutarate dependent dioxygenase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of G1/S transition of mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
retinoblastoma-like protein 2
Names
retinoblastoma-like 2 (p130)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041773.1 Reference Mmul_10 Primary Assembly

    Range
    40495165..40623360
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015126138.2 → XP_014981624.1  retinoblastoma-like protein 2 isoform X5

    UniProtKB/TrEMBL
    H9ZBY9
    Conserved Domains (3) summary
    pfam01857
    Location:704 → 887
    RB_B; Retinoblastoma-associated protein B domain
    pfam01858
    Location:286 → 478
    RB_A; Retinoblastoma-associated protein A domain
    pfam11934
    Location:1 → 105
    DUF3452; Domain of unknown function (DUF3452)

  2. XM_015126135.2 → XP_014981621.1  retinoblastoma-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5QDE7, H9ZBY9
    Related
    ENSMMUP00000046066.1, ENSMMUT00000062757.2
    Conserved Domains (3) summary
    pfam01857
    Location:835 → 1018
    RB_B; Retinoblastoma-associated protein B domain
    pfam01858
    Location:417 → 609
    RB_A; Retinoblastoma-associated protein A domain
    pfam11934
    Location:104 → 236
    DUF3452; Domain of unknown function (DUF3452)

  3. XM_015126136.2 → XP_014981622.1  retinoblastoma-like protein 2 isoform X2

    UniProtKB/TrEMBL
    G7NPA8
    Conserved Domains (3) summary
    pfam01857
    Location:835 → 1017
    RB_B; Retinoblastoma-associated protein B domain
    pfam01858
    Location:417 → 609
    RB_A; Retinoblastoma-associated protein A domain
    pfam11934
    Location:104 → 236
    DUF3452; Domain of unknown function (DUF3452)

  4. XM_015126140.2 → XP_014981626.1  retinoblastoma-like protein 2 isoform X6

    UniProtKB/TrEMBL
    A0A1D5QRR9
    Conserved Domains (3) summary
    pfam01857
    Location:648 → 831
    RB_B; Retinoblastoma-associated protein B domain
    pfam01858
    Location:230 → 422
    RB_A; Retinoblastoma-associated protein A domain
    pfam11934
    Location:26 → 49
    DUF3452; Domain of unknown function (DUF3452)

  5. XM_015126137.2 → XP_014981623.1  retinoblastoma-like protein 2 isoform X3

    UniProtKB/TrEMBL
    H9ZBY9
    Conserved Domains (3) summary
    pfam01857
    Location:761 → 944
    RB_B; Retinoblastoma-associated protein B domain
    pfam01858
    Location:343 → 535
    RB_A; Retinoblastoma-associated protein A domain
    pfam11934
    Location:30 → 162
    DUF3452; Domain of unknown function (DUF3452)

  6. XM_028841017.1 → XP_028696850.1  retinoblastoma-like protein 2 isoform X4

    UniProtKB/TrEMBL
    G7NPA8
    Conserved Domains (4) summary
    pfam01858
    Location:343 → 535
    RB_A; Retinoblastoma-associated protein A domain
    pfam15662
    Location:859 → 915
    SPATA3; Spermatogenesis-associated protein 3 family
    pfam01857
    Location:763 → 944
    RB_B; Retinoblastoma-associated protein B domain
    pfam11934
    Location:30 → 162
    DUF3452; Domain of unknown function (DUF3452)
Nucleotide Protein
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