U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SATB1 SATB homeobox 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 696862, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
SATB1provided by VGNC
Official Full Name
SATB homeobox 1provided by VGNC
Primary source
VGNC:VGNC:84086
See related
Ensembl:ENSMMUG00000019009
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SATB1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (29263868..29363646)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (174973614..175073398, complement)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC106997133 Neighboring gene UV excision repair protein RAD23 homolog B Neighboring gene phosducin-like protein 3 pseudogene Neighboring gene inorganic pyrophosphatase-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
DNA-binding protein SATB1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001265648.1 → NP_001252577.1  DNA-binding protein SATB1

    See identical proteins and their annotated locations for NP_001252577.1

    Status: PROVISIONAL

    Source sequence(s)
    JV667263
    UniProtKB/TrEMBL
    H9YUZ5, I2CY91
    Related
    ENSMMUP00000076307.1, ENSMMUT00000088916.1
    Conserved Domains (4) summary
    smart00389
    Location:644 → 701
    HOX; Homeodomain
    pfam02376
    Location:497 → 567
    CUT; CUT domain
    pfam16534
    Location:72 → 170
    ULD; Ubiquitin-like oligomerization domain of SATB
    pfam16557
    Location:176 → 246
    CUTL; CUT1-like DNA-binding domain of SATB

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    29263868..29363646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028843128.1 → XP_028698961.1  DNA-binding protein SATB1 isoform X1

    UniProtKB/TrEMBL
    F6XW50, G7MJX0
    Conserved Domains (4) summary
    smart00389
    Location:676 → 733
    HOX; Homeodomain
    pfam02376
    Location:497 → 567
    CUT; CUT domain
    pfam16534
    Location:72 → 170
    ULD; Ubiquitin-like oligomerization domain of SATB
    pfam16557
    Location:176 → 246
    CUTL; CUT1-like DNA-binding domain of SATB

  2. XM_028843130.1 → XP_028698963.1  DNA-binding protein SATB1 isoform X1

    UniProtKB/TrEMBL
    F6XW50, G7MJX0
    Conserved Domains (4) summary
    smart00389
    Location:676 → 733
    HOX; Homeodomain
    pfam02376
    Location:497 → 567
    CUT; CUT domain
    pfam16534
    Location:72 → 170
    ULD; Ubiquitin-like oligomerization domain of SATB
    pfam16557
    Location:176 → 246
    CUTL; CUT1-like DNA-binding domain of SATB

  3. XM_028843129.1 → XP_028698962.1  DNA-binding protein SATB1 isoform X1

    UniProtKB/TrEMBL
    F6XW50, G7MJX0
    Conserved Domains (4) summary
    smart00389
    Location:676 → 733
    HOX; Homeodomain
    pfam02376
    Location:497 → 567
    CUT; CUT domain
    pfam16534
    Location:72 → 170
    ULD; Ubiquitin-like oligomerization domain of SATB
    pfam16557
    Location:176 → 246
    CUTL; CUT1-like DNA-binding domain of SATB

  4. XM_015132197.2 → XP_014987683.1  DNA-binding protein SATB1 isoform X2

    UniProtKB/TrEMBL
    H9YUZ5, I2CY91
    Conserved Domains (4) summary
    smart00389
    Location:644 → 701
    HOX; Homeodomain
    pfam02376
    Location:497 → 567
    CUT; CUT domain
    pfam16534
    Location:72 → 170
    ULD; Ubiquitin-like oligomerization domain of SATB
    pfam16557
    Location:176 → 246
    CUTL; CUT1-like DNA-binding domain of SATB

  5. XM_015132200.2 → XP_014987686.1  DNA-binding protein SATB1 isoform X1

    UniProtKB/TrEMBL
    F6XW50, G7MJX0
    Conserved Domains (4) summary
    smart00389
    Location:676 → 733
    HOX; Homeodomain
    pfam02376
    Location:497 → 567
    CUT; CUT domain
    pfam16534
    Location:72 → 170
    ULD; Ubiquitin-like oligomerization domain of SATB
    pfam16557
    Location:176 → 246
    CUTL; CUT1-like DNA-binding domain of SATB

  6. XM_028843126.1 → XP_028698959.1  DNA-binding protein SATB1 isoform X1

    UniProtKB/TrEMBL
    F6XW50, G7MJX0
    Related
    ENSMMUP00000024996.4, ENSMMUT00000026713.4
    Conserved Domains (4) summary
    smart00389
    Location:676 → 733
    HOX; Homeodomain
    pfam02376
    Location:497 → 567
    CUT; CUT domain
    pfam16534
    Location:72 → 170
    ULD; Ubiquitin-like oligomerization domain of SATB
    pfam16557
    Location:176 → 246
    CUTL; CUT1-like DNA-binding domain of SATB

  7. XM_028843127.1 → XP_028698960.1  DNA-binding protein SATB1 isoform X1

    UniProtKB/TrEMBL
    F6XW50, G7MJX0
    Conserved Domains (4) summary
    smart00389
    Location:676 → 733
    HOX; Homeodomain
    pfam02376
    Location:497 → 567
    CUT; CUT domain
    pfam16534
    Location:72 → 170
    ULD; Ubiquitin-like oligomerization domain of SATB
    pfam16557
    Location:176 → 246
    CUTL; CUT1-like DNA-binding domain of SATB
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.