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RIOX1 ribosomal oxygenase 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 696773, updated on 17-Aug-2024

Summary

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Official Symbol
RIOX1provided by VGNC
Official Full Name
ribosomal oxygenase 1provided by VGNC
Primary source
VGNC:VGNC:76787
See related
Ensembl:ENSMMUG00000000315
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
C7H14orf169
Orthologs
human mouse all
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Genomic context

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See RIOX1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (135627866..135658643)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (135877280..135887704)

Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene NUMB endocytic adaptor protein Neighboring gene uncharacterized LOC114679597 Neighboring gene HEAT repeat containing 4 Neighboring gene nucleophosmin pseudogene Neighboring gene acyl-CoA thioesterase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3K36 demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone H3K4 demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66; ribosomal oxygenase 1
Names
lysine-specific demethylase NO66
XP_001090820.1
XP_028707490.1
XP_028707491.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041760.1 Reference Mmul_10 Primary Assembly

    Range
    135627866..135658643
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028851657.1 → XP_028707490.1  ribosomal oxygenase 1

    UniProtKB/TrEMBL
    F6YUZ8, H9ZDL1
    Conserved Domains (1) summary
    pfam08007
    Location:217 → 558
    Cupin_4; Cupin superfamily protein

  2. XM_028851658.1 → XP_028707491.1  ribosomal oxygenase 1

    UniProtKB/TrEMBL
    F6YUZ8, H9ZDL1
    Conserved Domains (1) summary
    pfam08007
    Location:217 → 558
    Cupin_4; Cupin superfamily protein

  3. XM_001090820.4 → XP_001090820.1  ribosomal oxygenase 1

    See identical proteins and their annotated locations for XP_001090820.1

    UniProtKB/TrEMBL
    F6YUZ8, H9ZDL1
    Related
    ENSMMUP00000000425.1, ENSMMUT00000000458.3
    Conserved Domains (1) summary
    pfam08007
    Location:217 → 558
    Cupin_4; Cupin superfamily protein
Nucleotide Protein
Heading Accession and Version

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